Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03125 ATGTCTAATACTGTGATTGTTTTCGACTTTGACAAAACCATCATTGATTGTGATAGTGATAATTGGGTTGTTGATGAATTGGGTTTCACTGATTTGTTCAACCAGCTTCTTCCTACCATGCCTTGGAATTCCCTCATGGACAAGATGATGATGGAGCTTCATTCAGAAGGTGTAACAATTGAAGACATTGAAAAAGTTCTTCATAGGATTCCAATTCATAACAGAATAATACCTGCAATTAAATCAGCACATGCTTTAGGCTGTGATTTGAGGATTGTCAGCGATGCCAATGTGTTTTTCATTCAAACTATTTTGAAGCATTTGGGAATAAGTGAATGTTTTTCAGAGATTAACACTAATCCAGGTTATGTTAATGAAGAAGGACGGTTAAGAATTTTGCCTCATCATGATTTCAACAAGGCTTCACATGGTTGCACTATCTGTCCTCCTAATATGTGCAAGGGTTTAATCATAGATAGAATCCAAAATTCAATTTCTGAGGATAATAACAAGAGGTTTATCTACCTTGGTGATGGAGTTGGTGATTATTGTCCTAGCTTGAGACTTAAAGAGAGAGACTTCATGATGCCAAGGAAGAACTTTCCGGTGTGGGACTTGATATGCAAAGACCCTTCACTTATTAAGGCTGAAATTCATGCTTGGTGTGATGGAGAAGAGCTTGAACAAATTTTGATACAATTGATCAACAAAATTCTCATTGAGGAAAATGCTCAATTCATTTCATCTGATTGCAAGCTACAAACTCTTTCAATCCCTGTCCATGAATCCTTGCCTAAAGCTCTCTCAGTTAGGCCATGA 819 0.37 MSNTVIVFDFDKTIIDCDSDNWVVDELGFTDLFNQLLPTMPWNSLMDKMMMELHSEGVTIEDIEKVLHRIPIHNRIIPAIKSAHALGCDLRIVSDANVFFIQTILKHLGISECFSEINTNPGYVNEEGRLRILPHHDFNKASHGCTICPPNMCKGLIIDRIQNSISEDNNKRFIYLGDGVGDYCPSLRLKERDFMMPRKNFPVWDLICKDPSLIKAEIHAWCDGEELEQILIQLINKILIEENAQFISSDCKLQTLSIPVHESLPKALSVRP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03125 272 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Car07g03125 272 SUPERFAMILY HAD-like 3 190 IPR036412 -
Car07g03125 272 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
Car07g03125 272 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 199 IPR006384 GO:0016791
Car07g03125 272 Gene3D - 1 188 IPR023214 -
Car07g03125 272 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 270 IPR016965 GO:0016791
Car07g03125 272 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Car07g03125 272 PANTHER INORGANIC PYROPHOSPHATASE 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03125 Car-Chr7 58445048 58447385 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03125 K13248 - gmx:100785878 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03125 07 58445048 58447385 Car01g02723 01 52661235 52663683 ECH
Car06g00373 06 3888275 3890343 Car07g03125 07 58445048 58447385 ECH
Car07g03125 07 58445048 58447385 Car07g03125 07 58445048 58447385 ECH
Car07g03125 07 58445048 58447385 Car01g02723 01 52661235 52663683 PCT