Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00373 ATGGTGATGGTGTTATTGGACTTTGATCGGACCATAATCGACGACGACAGCGACAGTTGGGTGATCAGTGAAATGGGTCTGACGGAGGTTTTCAACGAACTCCGGTCCAGCATGCCATGGACATCTCTCATGAACAGGATGATGGAAGAACTCCATTCCAAAGGTATCTCCATCAACACCATTGCTCACTGCCTTCATTCCGCTTTCTTACATCCAAACATTCTTTCCGCCATCCAATCTGCTCACTCTCTTGGATGTGACTTGAGGATTATTAGTGACGCCAATTTCTTCTCAATTCAGACTATTTTGGAACACCATAATCTGTTAGGCTGTTTTTCCCAAATCAATACAAATCCAGCTTTTGTAGATGATAAGGGTTGCCTTTGTATTACTCCATTTCATGATTCAACAACATTGCCTCCTCATGCTTGTCACCTTTGTCCTCCCAATATGTGCAAGGGTTTGGTAATAGACCAAATCCGAGGTTCTTTAGGTGAAAGCAAAACAAGATTCATCTACGTTGGAGATGGAATGGGTGATTATTGCCCTACTTTGAAGCTTGAGGGAGGTGATTTTGTAATGCCGAGGAAGAATTATCCCCTCTGGAACAAGATTTGCAGTGATCCAAAACTAGTTCATGCAGAAGTTCATGATTGGAGCAGTGGGGAGGAGTTCGAGAACATTCTACTCAACCTTGTCAACAAATTAGCTACATAA 717 0.4268 MVMVLLDFDRTIIDDDSDSWVISEMGLTEVFNELRSSMPWTSLMNRMMEELHSKGISINTIAHCLHSAFLHPNILSAIQSAHSLGCDLRIISDANFFSIQTILEHHNLLGCFSQINTNPAFVDDKGCLCITPFHDSTTLPPHACHLCPPNMCKGLVIDQIRGSLGESKTRFIYVGDGMGDYCPTLKLEGGDFVMPRKNYPLWNKICSDPKLVHAEVHDWSSGEEFENILLNLVNKLAT 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00373 238 PANTHER THIAMINE PHOSPHATE PHOSPHATASE-LIKE PROTEIN 2 236 - -
Car06g00373 238 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 185 - -
Car06g00373 238 Pfam Putative Phosphatase 3 233 IPR016965 GO:0016791
Car06g00373 238 PANTHER PHOSPHATASE, ORPHAN 1, 2 2 236 IPR016965 GO:0016791
Car06g00373 238 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 197 IPR006384 GO:0016791
Car06g00373 238 PIRSF PLP_phosphatas_PHOSPHO2 1 237 IPR016965 GO:0016791
Car06g00373 238 SUPERFAMILY HAD-like 3 183 IPR036412 -
Car06g00373 238 Gene3D - 2 187 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00373 Car-Chr6 3888275 3890343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00373 K13248 - gmx:100306472 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00373 06 3888275 3890343 Car07g03125 07 58445048 58447385 ECH
Car06g00373 06 3888275 3890343 Car01g02723 01 52661235 52663683 ECH
Car06g00373 06 3888275 3890343 Car06g00373 06 3888275 3890343 ECH