Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car07g03124 | ATGTCTAATATTGTGATTGTTTTCGACTTTGACAAAACCATCATTGATTGTGATAGTGATAATTGGGTTATTGATGAATTGGGTTTCACCGATTTGTTCAACCAGCTCCTTCCCACAATGCCTTGGAACTCTCTCATGGACAAGATGATGATGGAACTTCATTCAGAAGGTGTAACAATTGAAGACATTGAAAAGGTTCTTCATAGGATTCCAATTCACAACAGAATAATACCAGCAATTAAATCAGCACATGCTTTAGGCTGTGATTTGAGAATTGTTAGCGATGCCAATATGTTTTTCATTCAAACTATTTTGAAGCATTTGGAAATAAGCCAATATTTCTCAGAGATTAACACTAATCCAGGTTATGTTAATCAAGAAGGAAGATTAAGAATTTTGCCTTATCATGATTTCAACAATGCTTCACATGGTTGCACTCTCTGCCCTCCCAACATGTGCAAGGGTATTATAGTAGATAGAATCCAAAGTTCAATTTCTGTATTAGAAAACAAGAGGTTTATATACCTTGGAGATGGCGCTGGAGATTATTGTCCTACCTTAAGACTTAAAGAGAGAGATTTCATGATGCCAAGGAAGAACTTTCCGGTGTGGGACTTGATATGCAAAGACCCTTCACTTATTAAGGCTGAAATTCATGGTTGGTGTGATGGAGAAGAGCTTGAACAAGTTTTGATACAATTGATCAACAAAATAACCATAGAAGAAAATGCTCAATTCATTTCATCTGATTGCAAGCTACAAAATCTATCAATCTCTGTCCTCGAATCATTGCCTAAAGTTCTTCCAGTTCAACCTTAA | 819 | 0.3602 | MSNIVIVFDFDKTIIDCDSDNWVIDELGFTDLFNQLLPTMPWNSLMDKMMMELHSEGVTIEDIEKVLHRIPIHNRIIPAIKSAHALGCDLRIVSDANMFFIQTILKHLEISQYFSEINTNPGYVNQEGRLRILPYHDFNNASHGCTLCPPNMCKGIIVDRIQSSISVLENKRFIYLGDGAGDYCPTLRLKERDFMMPRKNFPVWDLICKDPSLIKAEIHGWCDGEELEQVLIQLINKITIEENAQFISSDCKLQNLSISVLESLPKVLPVQP | 272 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car07g03124 | 272 | TIGRFAM | DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | 3 | 199 | IPR006384 | GO:0016791 | |
| Car07g03124 | 272 | PANTHER | INORGANIC PYROPHOSPHATASE | 1 | 270 | - | - | |
| Car07g03124 | 272 | TIGRFAM | HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB | 5 | 188 | - | - | |
| Car07g03124 | 272 | Pfam | Putative Phosphatase | 4 | 235 | IPR016965 | GO:0016791 | |
| Car07g03124 | 272 | PIRSF | PLP_phosphatas_PHOSPHO2 | 1 | 239 | IPR016965 | GO:0016791 | |
| Car07g03124 | 272 | SUPERFAMILY | HAD-like | 4 | 186 | IPR036412 | - | |
| Car07g03124 | 272 | PANTHER | PHOSPHATASE, ORPHAN 1, 2 | 1 | 270 | IPR016965 | GO:0016791 | |
| Car07g03124 | 272 | Gene3D | - | 1 | 188 | IPR023214 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car07g03124 | Car-Chr7 | 58441821 | 58443430 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car07g03124 | K13248 | - | gmx:100786409 | 485.723 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car07g03124 | 07 | 58441821 | 58443430 | Car01g02722 | 01 | 52650587 | 52653089 | PCT |