Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02722 ATGATGGATGAACTTCATTCACAAGGAAAAACAATTGAAGAAATTGTTGAAGTTCTTAATAAAACTCCTATACATCCTCACATTGTCCCTGCCATTGAGGCTGCTTATTCCCTTGGGTGTGAGCTAAGGATTCTGAGTGATGCAAATATTTTCTTTATTGAAACAATTTTGAAACATCATGGGGTGCTGAATTGTTTCTCAGAAATAACTGCAAATCCAAGTTATGTTAATGAAGAAGGGAGGCTCAGAATTTGGCCCTACCATGATTATCTAAAATCTTCTCATGGATGTAACCTTTGTCCACCAAACATGTGCAAGGGATTGGTGATAGAAAGGTTCCAAAATTCACTTGATACTGGAAAGAAGAAATTTATCTACTTAGGAGATGGAAGTGGAGATTTTTGTCCAAGTCTAAAGCTCAAAGAGAGTGATTATGTGATGCCTAGAATTAACTTTGCATTGTGTGATTTAGTATCTAAAAATTCAAATGACATAAAGGCACATGTACATGGTTGGATAGATGGTGAAGAGCTTAAGCATGTTCTGCTTGATATCATCAACAAAACTATTGGTAAAGAAAATAATATTATTGGTCCAAAAATTATCTCAATTGATTGCAAATTGGGGACAATTTCAATTGAGACTCATAAACCTTTTCCTGAAGCCCTCCCAATTAGGAACTGA 684 0.3523 MMDELHSQGKTIEEIVEVLNKTPIHPHIVPAIEAAYSLGCELRILSDANIFFIETILKHHGVLNCFSEITANPSYVNEEGRLRIWPYHDYLKSSHGCNLCPPNMCKGLVIERFQNSLDTGKKKFIYLGDGSGDFCPSLKLKESDYVMPRINFALCDLVSKNSNDIKAHVHGWIDGEELKHVLLDIINKTIGKENNIIGPKIISIDCKLGTISIETHKPFPEALPIRN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02722 227 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 2 138 - -
Car01g02722 227 SUPERFAMILY HAD-like 2 137 IPR036412 -
Car01g02722 227 PIRSF PLP_phosphatas_PHOSPHO2 1 190 IPR016965 GO:0016791
Car01g02722 227 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 225 IPR016965 GO:0016791
Car01g02722 227 Pfam Putative Phosphatase 1 186 IPR016965 GO:0016791
Car01g02722 227 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 1 149 IPR006384 GO:0016791
Car01g02722 227 Gene3D - 1 145 IPR023214 -
Car01g02722 227 PANTHER 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02722 Car-Chr1 52650587 52653089 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02722 K13248 - gmx:100789743 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03124 07 58441821 58443430 Car01g02722 01 52650587 52653089 PCT