Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03112 ATGTTTATAAATGCAACTCCAAACCACTGCAATAACAAAGTAACAACATCCTTCACACAACAAATACTAATTTCTTTATTCCAAAAAAAAACCAACACTTTCTCTCTCTCACTCTCTCAGATGTGGCCAGATCTTATCCAAAAGGCTAAAGAAGGTGGTTTGGATGTGATTCAAACTTACGTTTTCTGGAATGGACATGAACCTTCACCTGGAAAATACTATTTTGAAGGGAACTATGATTTGGTGAAGTTCATAAGGCTGGTGCAGCAAGCAGGACTCTATGTTCATCTAAGAATTGGTCCTTATGCTTGTGCTGAGTGGAACTTTGGAGGTTTTCCTGTTTGGCTCAAGTACATTCCAGGAATCAGCTTCAGAACAGACAATGGACCTTTTAAGTTTCAAATGCAAAAATTTACTACTAAGATTGTGAATATAATGAAAGCAGAAAGACTATATGAGTCTCAGGGTGGTCCAATAATTTTATCTCAGATTGAAAATGAATATGGACCTATGGAGTATGAACTCGGTGCTCCTGGTAAAGCCTATGCTCAGTGGGCAGCACATATGGCTATAGGACTTGGTACTGGTGTTCCATGGGTCATGTGCAAACAAGATGATGCTCCTGATCCTGTTATTAATACTTGCAATGGTTTCTATTGTGATTATTTCTCTCCAAATAAGGCTTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACTGGATTTGGAGGTACAGTTCCTCATAGACCTGCCGAGGACTTGGCATTTTCAGTTGCAAGGTTTATACAGAAAGGAGGATCATTTATCAATTATTACATGTATCATGGTGGAACAAATTTTGGAAGAACTGCTGGCGGCCCTTTTATTGCCACAAGCTATGACTATGATGCACCTCTTGATGAATACGGGCTTCTTAGGCAACCAAAGTGGGGTCATTTGAAGGATTTACATAGAGCAATAAAACTCTGCGAACCGGCTTTAGTTTCTGCAGATCCTACCGTAACTCGTCTTGGAAACTATCAAGAGGCTCATGTTTTTAAGTCAAAGTCTGGAGCTTGTGCTGCATTCCTTGCAAACTATAATCCACACTCTTATTCAACAGTTGCATTTGGGAATCAGCATTACAACTTACCTCCTTGGTCTATAAGCATTCTTCCTAACTGCAAGCACACTGTCTATAACACTGCAAGGCTTGGTTCCCAGAGCGCGCAAATGAAGATGACACGTGTTCCTATTCATGGAGGACTCTCTTGGAAAGCGTTTAATGAAGAGACAACCACTACTGATGATAGTTCCTTCACTGTGACTGGCTTGTTAGAACAGATAAATGCAACTAGAGATTTATCTGACTATTTGTGGTACTCTACAGATGTTGTGATCAATCCGGACGAAGGATATTTTAGGAATGGAAAGAATCCTGTTCTTACAGTATTATCTGCTGGTCATGCTTTGCATGTTTTTATCAATGGTCAGCTGTCAGGAACTGTATATGGAAGCTTGGATTTCCCCAAACTAACTTTTAGTGAGAGTGTGAACCTTAGAGCTGGTGTTAACAAAATCTCCCTTCTAAGTGTTGCAGTTGGACTGCCGAATGTTGGTCCACATTTTGAAACATGGAACGCCGGTGTTCTTGGTCCAATTACATTGAATGGTCTCAACGAGGGGAGAAGAGACTTAACATGGCAGAAGTGGTCATACAAGGTTGGTCTTAAAGGTGAAGACTTGAGTCTTCATTCTCTTAGTGGAAGTTCCTCTGTTGATTGGCTTCAAGGATATTTAGTTTCTCGAAGGCAACCGTTGACTTGGTACAAAACTACTTTTGATGCCCCGGCCGGAGTTGCGCCGTTGGCTTTAGACATGAACAGCATGGGAAAAGGTCAAGTGTGGTTAAACGGACAGAGTCTCGGACGTTACTGGCCTGCTTATAAAGCAACTGGTTCTTGTGATTATTGCAATTATGCAGGAACTTACAATGAGAAAAAATGTGGAACTAACTGCGGCGAGGCTTCTCAACGATGGTATCATGTTCCTCATTCTTGGCTGAAACCAACAGGAAATTTGTTGGTTATGTTTGAGGAATTAGGTGGTGATCCAAATGGAGTGTTTTTGGTTAGAAGGGATATAGATAGTGTTTGTGCTGATATTTATGAGTGGCAACCAAATCTTGTTAGTTATCAGATGCAAGCTTCTGGTAAAGTAAGCAGACCTGTGAGTCCAAAAGCACATTTGTCATGTGGTCCTGGACAAAAAATCTCATCAATCAAATTTGCCAGCTTTGGCACTCCGGTAGGGTCTTGCGGAAACTACCGCGAAGGAAGTTGTCATGCTCACAAATCATATGATGCTTTTCAAAGGAATTGTGTTGGTCAGAGTTCATGCACCGTGACGGTATCTCCTGAAATTTTTGGAGGTGATCCATGTCCAAATGTCATGAAAAAACTCTCAGTAGAGGCCATTTGCACCTGA 2475 0.4117 MFINATPNHCNNKVTTSFTQQILISLFQKKTNTFSLSLSQMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIRLVQQAGLYVHLRIGPYACAEWNFGGFPVWLKYIPGISFRTDNGPFKFQMQKFTTKIVNIMKAERLYESQGGPIILSQIENEYGPMEYELGAPGKAYAQWAAHMAIGLGTGVPWVMCKQDDAPDPVINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTGFGGTVPHRPAEDLAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSADPTVTRLGNYQEAHVFKSKSGACAAFLANYNPHSYSTVAFGNQHYNLPPWSISILPNCKHTVYNTARLGSQSAQMKMTRVPIHGGLSWKAFNEETTTTDDSSFTVTGLLEQINATRDLSDYLWYSTDVVINPDEGYFRNGKNPVLTVLSAGHALHVFINGQLSGTVYGSLDFPKLTFSESVNLRAGVNKISLLSVAVGLPNVGPHFETWNAGVLGPITLNGLNEGRRDLTWQKWSYKVGLKGEDLSLHSLSGSSSVDWLQGYLVSRRQPLTWYKTTFDAPAGVAPLALDMNSMGKGQVWLNGQSLGRYWPAYKATGSCDYCNYAGTYNEKKCGTNCGEASQRWYHVPHSWLKPTGNLLVMFEELGGDPNGVFLVRRDIDSVCADIYEWQPNLVSYQMQASGKVSRPVSPKAHLSCGPGQKISSIKFASFGTPVGSCGNYREGSCHAHKSYDAFQRNCVGQSSCTVTVSPEIFGGDPCPNVMKKLSVEAICT 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03112 824 Gene3D - 431 568 - -
Car07g03112 824 ProSiteProfiles SUEL-type lectin domain profile. 738 824 IPR000922 GO:0030246
Car07g03112 824 PRINTS Glycosyl hydrolase family 35 signature 42 60 IPR001944 GO:0004553|GO:0005975
Car07g03112 824 PRINTS Glycosyl hydrolase family 35 signature 97 116 IPR001944 GO:0004553|GO:0005975
Car07g03112 824 PRINTS Glycosyl hydrolase family 35 signature 154 169 IPR001944 GO:0004553|GO:0005975
Car07g03112 824 PRINTS Glycosyl hydrolase family 35 signature 233 248 IPR001944 GO:0004553|GO:0005975
Car07g03112 824 PRINTS Glycosyl hydrolase family 35 signature 270 285 IPR001944 GO:0004553|GO:0005975
Car07g03112 824 PRINTS Glycosyl hydrolase family 35 signature 290 306 IPR001944 GO:0004553|GO:0005975
Car07g03112 824 PRINTS Glycosyl hydrolase family 35 signature 601 615 IPR001944 GO:0004553|GO:0005975
Car07g03112 824 PRINTS Glycosyl hydrolase family 35 signature 628 644 IPR001944 GO:0004553|GO:0005975
Car07g03112 824 Gene3D Glycosidases 24 327 - -
Car07g03112 824 PANTHER BETA-GALACTOSIDASE RELATED 34 818 IPR001944 GO:0004553|GO:0005975
Car07g03112 824 Pfam Beta-sandwich domain in beta galactosidase 330 400 IPR041392 -
Car07g03112 824 Pfam Galactose binding lectin domain 746 823 IPR000922 GO:0030246
Car07g03112 824 Gene3D - 592 715 - -
Car07g03112 824 Pfam Glycosyl hydrolases family 35 39 322 IPR031330 -
Car07g03112 824 SUPERFAMILY (Trans)glycosidases 32 327 IPR017853 -
Car07g03112 824 SUPERFAMILY Galactose-binding domain-like 565 732 IPR008979 -
Car07g03112 824 PANTHER BETA-GALACTOSIDASE 34 818 - -
Car07g03112 824 SUPERFAMILY Galactose-binding domain-like 385 556 IPR008979 -
Car07g03112 824 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 156 168 IPR019801 GO:0004553|GO:0005975
Car07g03112 824 Gene3D - 737 824 IPR043159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03112 Car-Chr7 58275760 58282833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03112 3 824 Glycoside Hydrolase AT3G13750 78.102 0.0 1373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03112 - - gmx:100785688 1523.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03112 07 58275760 58282833 Car07g03112 07 58275760 58282833 ECH
Car01g02711 01 52574597 52580720 Car07g03112 07 58275760 58282833 PCT