Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02711 ATGGTGGTGGGCTTCAACTTCAAGTTCATAATGTGGAAGGTGCCACCACTGTTAGTTCTGCTTCTGGCTTGTTCTCTTATTCATTCTGCTACAGCATCTGTTTCCTATGACTCTAAAGCTATCACCATTAATGGCCAAAGAAGAATTCTCATTTCTGGATCCATTCACTATCCAAGAAGCACCCCTGAGATGTGGCCAGATCTTATTCAGAAGGCTAAGGAAGGAGGTTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGACATGAACCTTCACCTGACAAATATTATTTTGAGGGGAACTATGATCTGGTGAAGTTCATAAAGTTAGTTCAGCAAGCTGGCCTTTATGTTCATCTAAGGATTGGTCCTTATGTTTGTGCTGAGTGGAACTTTGGGGGTTTTCCTGTTTGGCTTAAGTACATTCCTGGTATCAGTTTTAGAACAGACAATGAGCCATTTAAGTTTCAAATGCAAAAATTTACTGAGAAGATTGTTGGCATGATGAAAGAAGAAAGGTTATATGAGTCTCAGGGAGGTCCAATAATTCTATCTCAGATTGAAAATGAATATGGACCTGTGGAGTATGAAATTGGTGCTCCTGGTAAATCCTACACAAAGTGGGCAGCTGATATGGCTATAGGACTTGGTACTGGTGTTCCGTGGATCATGTGCAAGCAAGACGATGCTCCTGATCCTGTTATTAACACCTGCAATGGCTTCTACTGTGATTATTTCTCTCCAAACAAGGCTTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACCGAGTTTGGAGGTCCGGTTCCTCACCGACCTGCCGAAGACTTGGCATTTTCAGTTGCAAGATTTATACAAAAAGGAGGATCGTTTGTCAATTATTACATGTATCACGGAGGAACAAATTTTGGGAGAACTGCTGGTGGTCCTTTCATTGCTACAAGCTATGACTATGATGCACCTCTTGATGAATATGGATTGCTCAGGCAACCAAAATGGGGTCATCTGAAGGATTTACACAGAGCAATAAAACTCTCTGAACCTGCTTTAGTTTCTGGTGATCCTACTGTTACACGGATTGGAAACTATCAAGAGGCTCATGTGTTTAAATCAAAGTCGGGAGCTTGTGCTGCATTCCTTGCAAACTATAATCCAAAATCTTATGCAACAGTTGCATTTGGAAATATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGATTGCAAGAACACCGTTTACAACACTGCAAGGGTTGGTTCCCAGAGTGCTCAAATGAAGATGACTCGCGTTCCTATTCATGGTGGACTCTCTTGGCAAGTGTTCACTGAACAAACAGCCTCTACTGATGATAGTTCTTTCACCATGACTGGCCTATTGGAACAGTTAAATACAACAAGAGATTTAACCGATTATTTGTGGTACTCCACAGATGTTGTGATCGATACAGATGAAGGATTCTTGAGTAGTGGAAAGGATCCTGTTCTTACAGTGTTATCTGCCGGGCATGCTTTGCATGTTTTCGTCAATGACCAGCTTTCAGGAACTATATATGGAAGCTTAGAATTTCCCAAGCTAACATTTAGCCAGAATGTGAAGCTCAGACCTGGTGTCAACAAAATCTCTCTTCTAAGTGTTgcagttggactcccgAATGTTGGCCCTCATTTTGAAACATGGAATGCCGGTGTTCTCGGCCCTATTACATTAAATGGTCTCAATGAGGGGAGACGGGATTTGACATGGCAGAAATGGTCTTACAAGGTTGGTCTCAATGGCGAATCCTTGAGTCTTCATTCTCTCAGTGGAAGTTCCTCAGTAGATTGGATTCAGGGGAGTTTAGTTTCTCAAAGGCAGCCATTGACTTGGTACAAAACTACTTTTGATGCCCCGGATGGAATTGCACCATTTGCTTTAGACATGGGAAGTATGGGCAAAGGACAAGTGTGGTTAAATGGACAGAATATCGGCCGTTACTGGCCTGCTTATAAAGCATCTGGTACTTGTGATGACTGTGACTACGCAGGAACTTATAACGAAAATAAATGTAGAAGTAACTGCGGCGAAGCTTCTCAAACATGGTACCATGTTCCTCGTTCATGGCTGATACCAACTGGAAATTTATTGGTTGTGTTTGAAGAATTGGGTGGAGACCCTAATGGGATCTCTTTGGTCAGAAGGGATATTGATAGTGTATGTGCTGATATTTATGAGTGGCAGCCAAATCTTATAAGTTATCAGATGCAAACTTCTGGCAAAGTTAGCAAACCTGTGAGACCAAAAGCACATTTATCGTGCGGCCCCGGACAGAAAATCTCATCAATCAAATTTGCTAGCTTTGGTACTCCAGTAGGGTCTTGTGGAAATTTCCATGAAGGAAGCTGTCATGCTCACAAGTCTTATAATGCCTTTGAAAGGAATTGTATCGGACAAAACTTGTGCACGGTAACTGTGTCACCCGAAAATTTTGGAGGAGATCCATGTCCAAATGTCATGAAGAAACTCTCAGTGGAGGCCATTTGTACCTGA 2544 0.4171 MVVGFNFKFIMWKVPPLLVLLLACSLIHSATASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPDKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNEPFKFQMQKFTEKIVGMMKEERLYESQGGPIILSQIENEYGPVEYEIGAPGKSYTKWAADMAIGLGTGVPWIMCKQDDAPDPVINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGPVPHRPAEDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLSEPALVSGDPTVTRIGNYQEAHVFKSKSGACAAFLANYNPKSYATVAFGNMHYNLPPWSISILPDCKNTVYNTARVGSQSAQMKMTRVPIHGGLSWQVFTEQTASTDDSSFTMTGLLEQLNTTRDLTDYLWYSTDVVIDTDEGFLSSGKDPVLTVLSAGHALHVFVNDQLSGTIYGSLEFPKLTFSQNVKLRPGVNKISLLSVAVGLPNVGPHFETWNAGVLGPITLNGLNEGRRDLTWQKWSYKVGLNGESLSLHSLSGSSSVDWIQGSLVSQRQPLTWYKTTFDAPDGIAPFALDMGSMGKGQVWLNGQNIGRYWPAYKASGTCDDCDYAGTYNENKCRSNCGEASQTWYHVPRSWLIPTGNLLVVFEELGGDPNGISLVRRDIDSVCADIYEWQPNLISYQMQTSGKVSKPVRPKAHLSCGPGQKISSIKFASFGTPVGSCGNFHEGSCHAHKSYNAFERNCIGQNLCTVTVSPENFGGDPCPNVMKKLSVEAICT 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02711 847 Gene3D Glycosidases 27 350 - -
Car01g02711 847 SUPERFAMILY Galactose-binding domain-like 408 579 IPR008979 -
Car01g02711 847 Pfam Galactose binding lectin domain 769 846 IPR000922 GO:0030246
Car01g02711 847 Gene3D - 758 847 IPR043159 -
Car01g02711 847 PANTHER BETA-GALACTOSIDASE RELATED 14 841 IPR001944 GO:0004553|GO:0005975
Car01g02711 847 SUPERFAMILY Galactose-binding domain-like 588 755 IPR008979 -
Car01g02711 847 Pfam Glycosyl hydrolases family 35 41 345 IPR031330 -
Car01g02711 847 Pfam Beta-sandwich domain in beta galactosidase 353 424 IPR041392 -
Car01g02711 847 ProSiteProfiles SUEL-type lectin domain profile. 761 847 IPR000922 GO:0030246
Car01g02711 847 SUPERFAMILY (Trans)glycosidases 34 349 IPR017853 -
Car01g02711 847 Gene3D - 447 591 - -
Car01g02711 847 PRINTS Glycosyl hydrolase family 35 signature 44 61 IPR001944 GO:0004553|GO:0005975
Car01g02711 847 PRINTS Glycosyl hydrolase family 35 signature 65 83 IPR001944 GO:0004553|GO:0005975
Car01g02711 847 PRINTS Glycosyl hydrolase family 35 signature 120 139 IPR001944 GO:0004553|GO:0005975
Car01g02711 847 PRINTS Glycosyl hydrolase family 35 signature 177 192 IPR001944 GO:0004553|GO:0005975
Car01g02711 847 PRINTS Glycosyl hydrolase family 35 signature 256 271 IPR001944 GO:0004553|GO:0005975
Car01g02711 847 PRINTS Glycosyl hydrolase family 35 signature 293 308 IPR001944 GO:0004553|GO:0005975
Car01g02711 847 PRINTS Glycosyl hydrolase family 35 signature 313 329 IPR001944 GO:0004553|GO:0005975
Car01g02711 847 PRINTS Glycosyl hydrolase family 35 signature 624 638 IPR001944 GO:0004553|GO:0005975
Car01g02711 847 PRINTS Glycosyl hydrolase family 35 signature 651 667 IPR001944 GO:0004553|GO:0005975
Car01g02711 847 Gene3D - 605 738 - -
Car01g02711 847 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 179 191 IPR019801 GO:0004553|GO:0005975
Car01g02711 847 PANTHER BETA-GALACTOSIDASE 14 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02711 Car-Chr1 52574597 52580720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02711 19 847 Glycoside Hydrolase AT3G13750 79.373 0.0 1416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02711 - - gmx:100787084 1608.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02711 01 52574597 52580720 Car01g02711 01 52574597 52580720 ECH
Car01g02711 01 52574597 52580720 Car07g03112 07 58275760 58282833 PCT