Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03106 ATGGCTTCAGTTGGTGCAGTCAAATTCTTGTTATGCTTATTAGTAGTTCTATGGCTCTTCAATTTTCTACCTCCTTGTCAAGGTAAAGAGAATTGGTATGAAAAACACTACTCTTTCATAAAAAAAGCAAGTTCATTTTCATCATCATCAATTTCAACAACAACACTAAACAAAGCTTATGACTACATAATAGTTGGAGGAGGAACTGCAGGGTGTCCTTTAGCTGCAACACTATCACAAAACTTCACAGTTTTGCTTCTTGAAAGAGGAAGTGTTCCTTTCACTAATCCAAATGTTACATTTCTTGAGAATTTTCACATTACCTTGGCAGACACTTCACCTACTTCAGCTTCTCAATACTTTGTTTCAACCGATGGTGTTTTTAATGCAAGAGGTAGAGTTTTGGGTGGTGGTAGTTCTATCAATGCTGGTTTCTATACTAGAGCAAGTTCAAGGTTTATATACAAGGCAGGGTGGGATGCGAAACTAGTAAATGAATCATACCCTTGGGTTGAGAAGCAAATTGTTCATCGTCCAAAGTTTTCAGCTTTTCAAAGAGCAGTAAGAGACAGCCTTATAGACTCTGGAGTCTCTCCTTATAATGGTTTCACCTATGATCATATCTATGGAACAAAGGTTGGTGGAACCATTTTCGACAGATTCGGTCGCCGCCATTCAGCTGCTGAACTTCTTGCTTCTGGAAACACTGATAAACTTACTGTTTTGGTCCATGCCACTGTCCAAAATATTGTTTTTGATACAACAGGTAAAACACCAAAAGCTGTAGGGGTGATTTTTAAGGATGAAAATGGGAAACAGCACGAGGCAATGCTGGAAAATGATAGGCATAGTGAAGTGATATTGTCTAGTGGGGCAATTGGGACTCCTCAAATGCTATTGCTAAGTGGAATTGGGCCTAAAGATGAACTCCAAAAATTGAACATCTCAGTGGTCCTTGACAACCCTTTTGTTGGGAAAGGAATGGTAGATAATCCAATGAACACAGTTTTTGTTCCTTCTAATAGGCCTGTTTATCATTCACTCATTGAAACTGTTGGCATCACTAAGAAAGGTGTGTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCTAATAGCAGCATTCACTGTCATCATGGGATCATGTCAGCTGAGATTGGACAACTTTCCACAATTCCTCCAAAGCAAAGATCAATAGAAGCTATCAAAGATTATGTGAAGAACAAGCGAGATGTACCGGTCGAAGCATTCAAGGGAGGCTTTGTCTTGTCAAAAGTTGCAAGTGCTTGGTCAGTAGGTGAGCTTAAGTTGAACAATACCAATGTGGATGAAAACCCTAATGTTACCTTCAACTACTTCAGTCATCCATATGATCTTCAACGCTGCGTCGAGGGAATCAGATTGGCAATTAAAGTAGTCCAATCAAAACACTTCACAAACTACACATTGTGTAACAAACAAACCACTGAGAAACTTCTCAACCTTACTGTGAAGGCTAATGTCAACTTCATACCTAAGCATGCCAATGACACAGCATCCCTTGAGCAATTCTGCAGAGATACTGTCATCACAATTTGGCATTATCATGGTGGATGCCATGTAGGGAAGGTAGTTAGCCCTGATCTTAAGGTTCTTGATGTTGACAGACTTCGAGTTGTCGATGGCTCAACATTTGATGAGTCACCAGGAACAAATCCTCAAGCCACTGTGATGATGATGGGAAGGTACATGGGAGTGAAGATTTTGAGAGATAGGTTGGGGAGACTGGCTGGTATATAA 1776 0.4015 MASVGAVKFLLCLLVVLWLFNFLPPCQGKENWYEKHYSFIKKASSFSSSSISTTTLNKAYDYIIVGGGTAGCPLAATLSQNFTVLLLERGSVPFTNPNVTFLENFHITLADTSPTSASQYFVSTDGVFNARGRVLGGGSSINAGFYTRASSRFIYKAGWDAKLVNESYPWVEKQIVHRPKFSAFQRAVRDSLIDSGVSPYNGFTYDHIYGTKVGGTIFDRFGRRHSAAELLASGNTDKLTVLVHATVQNIVFDTTGKTPKAVGVIFKDENGKQHEAMLENDRHSEVILSSGAIGTPQMLLLSGIGPKDELQKLNISVVLDNPFVGKGMVDNPMNTVFVPSNRPVYHSLIETVGITKKGVYIEASSGFSQSNSSIHCHHGIMSAEIGQLSTIPPKQRSIEAIKDYVKNKRDVPVEAFKGGFVLSKVASAWSVGELKLNNTNVDENPNVTFNYFSHPYDLQRCVEGIRLAIKVVQSKHFTNYTLCNKQTTEKLLNLTVKANVNFIPKHANDTASLEQFCRDTVITIWHYHGGCHVGKVVSPDLKVLDVDRLRVVDGSTFDESPGTNPQATVMMMGRYMGVKILRDRLGRLAGI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03106 591 Pfam GMC oxidoreductase 430 574 IPR007867 GO:0016614
Car07g03106 591 ProSitePatterns GMC oxidoreductases signature 2. 291 305 IPR000172 GO:0016614|GO:0050660
Car07g03106 591 Gene3D - 60 573 IPR036188 -
Car07g03106 591 Gene3D - 177 523 - -
Car07g03106 591 SUPERFAMILY FAD/NAD(P)-binding domain 52 583 IPR036188 -
Car07g03106 591 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 591 - -
Car07g03106 591 Pfam GMC oxidoreductase 207 332 IPR000172 GO:0016614|GO:0050660
Car07g03106 591 Pfam GMC oxidoreductase 60 152 IPR000172 GO:0016614|GO:0050660
Car07g03106 591 PANTHER OSJNBA0019K04.7 PROTEIN 2 591 - -
Car07g03106 591 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 530 - -
Car07g03106 591 PIRSF Alcohol_oxidase 37 589 IPR012132 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03106 Car-Chr7 58208900 58216710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03106 14 584 Miscellaneous Gene Families AT5G51950 49.144 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03106 K15403 - gmx:100788704 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03106 07 58208900 58216710 Car07g03106 07 58208900 58216710 ECH
Car01g02709 01 52557506 52564077 Car07g03106 07 58208900 58216710 PCT