Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02709 ATGGCATCACTTGCTCTTGTCAAATTCCTGCTCTGCTTCCTTATAATATGCCTCTTCAACTTTCTACCTCTATGCCAAGGTAACAATGAATATAGGTACCCTTTTATAAGAAAAGCAAGTTCATTTTCATCAACCACCAAAATAAAGAATGGTTATGACTACATAATAGTAGGGGGGGGAACAGCAGGGTGTCCTTTAGCTGCAACACTATCTAAGAAATTCAATGTTCTGATGCTTGAAAGAGGAGGAGTCCCTTTCACCAACCCTAATGTCTCATTTCTTGACAACTTTCACATTACTTTGGCTGACACGTCACCAACTTCAGCTTCCCAGTTCTTCATTTCTACAGATGGTGTGTTCAATGCAAGAGCAAGAGTTTTGGGTGGTGGTAGCTCCATTAATGCTGGCTTCTACACTAGAGCAAGCCCAAGATTTATAGAGAAGGTGGGGTGGGATGCAAAGCTGGTAAAAAAATCATATAATTGGGTTGAGAAGCAGATTGTTCACCGGCCAACATTTTCACATTGGCAGAGAGCATTGAAGGAAGGTCTTCTAGATGCTGGTGTCTCTCCTTTTAATGGATTCACATATGAACACAAATATGGTACCAAAGTTGGTGGAACCATTTTTGATAGATTTGGTCGCCGCCACACTGCTGCTGAATTGCTTGCTTCTTCAAATCCTCACAAACTCACTGTTTTGACCTATGCTACTGTCCAAAACATTGTTTTTGATACAACAGGAAAAAGAGCAAAAGCTATAGGGGTAATTTTCAAGGATGAAAATGGGAAACAGCATAAAGCAATTCTAGGAAATGATAGGAAGAGTGAAGTGATTGTGTCAAGTGGTGCAATTGGGACTCCTCAAATGTTATTGCTAAGTGGAATTGGCCCAAAAGAAGAACTTAAGAAGATGAACATTCCTGTGGTACTTGATAACCATTTTGTTGGGAAGGGTATGGTTGATAATCCAATGAATACAATTTTTGTTCCACTTAAGAAAGCAGTTAAGCAGTCACTGATTGAAACAGTTGGTATTACAAATAAGGGTGTGTATATTGAAGCTAGCTGTGGGTTTGGACAGTCCAAAGACAGCATTCACTGTCATCATGGTATGTTGTCAGCTGAGATTGGACAACTCTCCACAATTCCTCCAAAGCAAAGAACAGCAGAAGCTGTTAAAGCATTTGTGAAAAACAAGAAAGACATTCCAGTTGAAGCATTCAAAGGAGGCTTCATCTTATCAAAAGTTGCAAGTCCTTGGTCAACAGGAAATCTCAAATTGATCAACACCAATGTGGAAGACAACCCTGCTGTTACCTTCAATTACTTCAATCATCCTTATGATCTTCAACGCTGCGTCGAAGGTATTCGCTTAGCAACAAAGGTTGTTCAGTCACAACACTTCACAAACCTCACTTTGTCTGACAGAGAAACTGCAGAACAATTTCTTAACATGACTGTGAAGGCTAATATCAACCTCATACCGAAGCATGTCAACGATACGAAATCACTAGAACAGTTTTGCAGAGACACTGTGATCACTATTTGGCACTATCATGGTGGATGCCATGTAGGGAAGGTAATTGATTCTGATTATAAGGTTCTTGGTCTTAACAGAATTCGTGTCATAGATGGTTCCACTTTTACTGAGTCACCAGGAACCAATCCTCAAGCTACTGTCATGATGATGGGAAGGTATATGGGACTGAAGATTTTAAGAGATAGGATGGGGAAATTTGTTGGTGTTTGA 1752 0.4001 MASLALVKFLLCFLIICLFNFLPLCQGNNEYRYPFIRKASSFSSTTKIKNGYDYIIVGGGTAGCPLAATLSKKFNVLMLERGGVPFTNPNVSFLDNFHITLADTSPTSASQFFISTDGVFNARARVLGGGSSINAGFYTRASPRFIEKVGWDAKLVKKSYNWVEKQIVHRPTFSHWQRALKEGLLDAGVSPFNGFTYEHKYGTKVGGTIFDRFGRRHTAAELLASSNPHKLTVLTYATVQNIVFDTTGKRAKAIGVIFKDENGKQHKAILGNDRKSEVIVSSGAIGTPQMLLLSGIGPKEELKKMNIPVVLDNHFVGKGMVDNPMNTIFVPLKKAVKQSLIETVGITNKGVYIEASCGFGQSKDSIHCHHGMLSAEIGQLSTIPPKQRTAEAVKAFVKNKKDIPVEAFKGGFILSKVASPWSTGNLKLINTNVEDNPAVTFNYFNHPYDLQRCVEGIRLATKVVQSQHFTNLTLSDRETAEQFLNMTVKANINLIPKHVNDTKSLEQFCRDTVITIWHYHGGCHVGKVIDSDYKVLGLNRIRVIDGSTFTESPGTNPQATVMMMGRYMGLKILRDRMGKFVGV 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02709 583 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 583 - -
Car01g02709 583 PANTHER OSJNBA0019K04.7 PROTEIN 2 583 - -
Car01g02709 583 SUPERFAMILY FAD/NAD(P)-binding domain 49 575 IPR036188 -
Car01g02709 583 Pfam GMC oxidoreductase 52 324 IPR000172 GO:0016614|GO:0050660
Car01g02709 583 Gene3D - 169 515 - -
Car01g02709 583 PIRSF Alcohol_oxidase 30 582 IPR012132 GO:0050660
Car01g02709 583 Pfam GMC oxidoreductase 420 566 IPR007867 GO:0016614
Car01g02709 583 ProSitePatterns GMC oxidoreductases signature 1. 124 147 IPR000172 GO:0016614|GO:0050660
Car01g02709 583 Gene3D - 52 565 IPR036188 -
Car01g02709 583 SUPERFAMILY FAD-linked reductases, C-terminal domain 320 522 - -
Car01g02709 583 ProSitePatterns GMC oxidoreductases signature 2. 283 297 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02709 Car-Chr1 52557506 52564077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02709 13 578 Miscellaneous Gene Families AT3G56060 48.070 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02709 K15403 - gmx:100818122 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02709 01 52557506 52564077 Car07g03106 07 58208900 58216710 PCT