Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03094 ATGAATATCTCTATTTGGCTATTGACTCTCTTTACTATCATTTATGGTATTCTTCCTATTGAAGCTACTCACCATGTTTTCAGAAACCTTCAAAGTTTATCTTCTCATGATTCCTCCAATGATCAACCTTATAGAACTTCTTATCATTTCCAACCTCCCAAAAATTGGATAAATGATCCTAATGGACCAATGAGTTACAAAGGACTTTATCATCTATTCTATCAATACAATCCTAAAGGTGCAGTTTGGGGAAATATTGTGTGGGCACATTCAGTATCAACTGATCTTATTAACTGGACCCCACTAGATCAAGCCATCTCTCCATCTCAACCGTCCGATATAAATGGTTGTTGGTCAGGATCAACCACAATACTTAATGGTACCAAACCAGCAATTTTGTACACTGGAATTGACCAATTTAACCACCAAGTTCAAAATTTGGCCTACCCCAAAAATTTATCTGACCCTTTTCTTAGGGATTGGATTAAGTCAAAAAAAAATCCAGTAATGGAACCAACTAGTATTAATATGATTAATGCAAGTTCATTTAGGGACCCAACTAGTGGTTGGTTAGGAAAAGATGGACATTGGAGGGTAATTGTTGGTAGCAAAAGGGACACTAGGGGAATTGCAATTTTATATAGGAGTAAAGATTTTATTAATTGGATTGAAGCTAAACACCCTTTGTATTCATCTAAGGGCACTGGAATGTGGGAGTGTCCTGATTTTTATCCTGTTTTGAAATTTAGTTCAATTGGTGTTGACACATCATTGAATAATGATGATGTTAGGCATGTGTTGAAGGTTAGTTTGGATGATAAAAAGCATGATTATTATCTTATTGGGAGTTATGATGATGGAAAAGACAATTTTGTCCCTGATAAAGGGTTTCAGAATACTAGTGAATTTTTTTTGAGATATGATTATGGAAAATATTATGCCTCAAAAACTTTCTTTGATGATCAAAAGAATAGAAGGATTTTGCTTGGTTGGGTCAATGAATCATCAACTGTTGCTGATGATATCAAGAAAGGATGGTCTGGAATCCATACAATTCCAAGGGCTATTTGGTTGCACAAGTCAGGCAAACAGTTGGTACAATGGCCAGTTGTGGAAGTTGAGAAGCTAAGAGTAAATCTTGTCAACTTGCCCCCCAAAGTTCTCAAGGGAGGTGAATTGCTGCAAATTAACGGTGTCACAGCAGCACAAGCTGATGTTGAAATTTCATTTGAAGTGAATAACATTGGAGAGGCTGAAGTTTTGGACAATTGGACAGACCCTCAAATTCTGTGTAGCCAAAAGGGTTCATCAGTAAAAAGTGGTTTGGGACCCTTTGGTCTATTAGTTTTTGCTTCAAAGGGGTTGCAAGAGTTCACATCAGTGTTCTTTAGAATATTCAGATACCAACACAAAAATTTGGTGCTCTTTTGCAGTGACCAAAGCAGGTCTTCCTTGAATAAAGATAATGACATGACCACTTATGGGACTTTTATAGACGTGGATGTTGTTCACGAGAAGCTGTCATTGAGAAGTTTGATTGATCACTCTGTGGTAGAGAGTTTTGGAGGAGAAGGAAAAGCATGCATCACAGCCAGAGTTTATCCAACATTAGCCATCAATGATAAAGCACAACTTTATGCTTTCAATAATGGAACTACTGATGTCAAGATCAACAGATTGAGTGCTTGGAGCATGAAGAAAGCACAGTTAAATGGAAATTAA 1722 0.3688 MNISIWLLTLFTIIYGILPIEATHHVFRNLQSLSSHDSSNDQPYRTSYHFQPPKNWINDPNGPMSYKGLYHLFYQYNPKGAVWGNIVWAHSVSTDLINWTPLDQAISPSQPSDINGCWSGSTTILNGTKPAILYTGIDQFNHQVQNLAYPKNLSDPFLRDWIKSKKNPVMEPTSINMINASSFRDPTSGWLGKDGHWRVIVGSKRDTRGIAILYRSKDFINWIEAKHPLYSSKGTGMWECPDFYPVLKFSSIGVDTSLNNDDVRHVLKVSLDDKKHDYYLIGSYDDGKDNFVPDKGFQNTSEFFLRYDYGKYYASKTFFDDQKNRRILLGWVNESSTVADDIKKGWSGIHTIPRAIWLHKSGKQLVQWPVVEVEKLRVNLVNLPPKVLKGGELLQINGVTAAQADVEISFEVNNIGEAEVLDNWTDPQILCSQKGSSVKSGLGPFGLLVFASKGLQEFTSVFFRIFRYQHKNLVLFCSDQSRSSLNKDNDMTTYGTFIDVDVVHEKLSLRSLIDHSVVESFGGEGKACITARVYPTLAINDKAQLYAFNNGTTDVKINRLSAWSMKKAQLNGN 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03094 573 Pfam Glycosyl hydrolases family 32 C terminal 372 564 IPR013189 -
Car07g03094 573 Gene3D - 380 565 - -
Car07g03094 573 CDD GH32_Fruct1-like 55 358 - -
Car07g03094 573 PANTHER CELL-WALL INVERTASE 5 571 - -
Car07g03094 573 SUPERFAMILY Concanavalin A-like lectins/glucanases 369 567 IPR013320 -
Car07g03094 573 ProSitePatterns Glycosyl hydrolases family 32 active site. 49 62 IPR018053 GO:0004553|GO:0005975
Car07g03094 573 SMART glyco_32 49 525 IPR001362 GO:0004553|GO:0005975
Car07g03094 573 Gene3D Glycosyl hydrolase domain; family 43 53 379 IPR023296 -
Car07g03094 573 Pfam Glycosyl hydrolases family 32 N-terminal domain 49 369 IPR013148 -
Car07g03094 573 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 5 571 - -
Car07g03094 573 SUPERFAMILY Arabinanase/levansucrase/invertase 40 370 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03094 Car-Chr7 58101638 58106806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03094 64 571 Glycoside Hydrolase AT3G13790 64.341 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03094 K01193 - gmx:547681 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02701 01 52485398 52489636 Car07g03094 07 58101638 58106806 PCT