Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03061 ATGGCTTGCTTGACAAAGGATGGATCGTCGCAAGGGCAGAGATCTGCTGTTGAATTTATCAGCAAATCCCCTTCTAAGACTTTAATTATACCTGCCAAAGAACTTGTACAAGTCATAGCAAAGGATGTTGCTGTTTCTAGAGGTGGCCTAGCCAGTGAATCTGACTTTGATGTGCATCAGGAGATCATGGTTGATTCAGTAATATCTCAACCTCGTCATGTTGAGATAGGGAGAGAATTACACCGATGGGTACCCGATGAAGAGGATCAACAATGCCCTGAACTGGAAAATATCTTTGATGGCCCTTGGAATAGGGGATGGGATCAGTTTGAAACAAATGAAATGTTGTTTGGGGTAACAAGCACATTTGACGAGGAACTCTATACAACAAAGCTTGAAAAAGGGCCTCAGATGAGAGAGTTGGAGAAGCAAGCTTTAAGAATAGCAAGAGAAATTGAGGGTGAAGAAACCCAAGATCTTCATCTAGCAGAGGAAAGAGGCCTTTACCCTGATGACTTTGACATTGATGAAGAGACCAGATTCTCTTCAGTATATAGGGGCAAAGGTGTTGATGATAGAGAATATGGTGAAAATGAAGACAATTTGTTGGACTCGCACAACTCTGAAACATTTGGTGGTATGTCCAGTTCAGTCATTGAGAGACCAGGCAACATAAGTGGTGGGAAAAGCAGTTATGGAGCTCAAACATGGTCAAATATGTTATCATCTGAACTCCCTGGCCAAAGTTACTCATTTTCAGATGGGGAAAGCAGGATTCAAGATAACTCAGTTTGTGATGTACATGGAGCCAATGGTAACACCAAGGAAGAAAATCAGATGCAAGCTGAGGATGTCCAGCTGCTGAAATATGAGGATTTACAGTCAGCGCTCAACTTGAAGAAAGATGGCTCTGATAAAGTGGGATTGTCTCCTACTAATGCATCCTTCTATGCCTCATCTACTCATATTTCAGCGAAGGTTGATGACAAAACTGGATCACTTGGAGAGTTGACTAGGGGTTCAGAAACTGGCAAAGCAAATTGGGAAACAAAGCCCTTAAATTCACGTGGAAGATTAGAAACTAGTATGTCATCTGGTTCAGATTGTGTAGCAGGTGTGGCAACATATTCTGGTCCCAGTCTATCACCAAGTTCTTCACTTGGTTCACTGTCTTCCGAAAAATCAACTCTGAATCCTAATGCGAAGGAGTTTAAGCTCAACCCTAACGCCAAGAGTTTCATTCCATCTCAAACACCCGTTAGGCCTTGCTCCCCAGTGTCTGATGGTTCCTTCTATTACCCAGCTAACGTATCTACTGTACCGAGTATGCCAACCATGCCAATGGGTGTTGGAGTTGGAACTTCTTTTGCCGGGCCACAACCTATCATGTATAATCCACAGGTAGCTCAAATGCCATCTCAACAATATTTTCATCAGAATGGACCACAGTATGGACAACTTCATGGTCATCCTAGACAAGTTTTATACATGCCCAATTACCTACCTGAGGCGCCATATAAGGGACGGTATTGA 1533 0.4279 MACLTKDGSSQGQRSAVEFISKSPSKTLIIPAKELVQVIAKDVAVSRGGLASESDFDVHQEIMVDSVISQPRHVEIGRELHRWVPDEEDQQCPELENIFDGPWNRGWDQFETNEMLFGVTSTFDEELYTTKLEKGPQMRELEKQALRIAREIEGEETQDLHLAEERGLYPDDFDIDEETRFSSVYRGKGVDDREYGENEDNLLDSHNSETFGGMSSSVIERPGNISGGKSSYGAQTWSNMLSSELPGQSYSFSDGESRIQDNSVCDVHGANGNTKEENQMQAEDVQLLKYEDLQSALNLKKDGSDKVGLSPTNASFYASSTHISAKVDDKTGSLGELTRGSETGKANWETKPLNSRGRLETSMSSGSDCVAGVATYSGPSLSPSSSLGSLSSEKSTLNPNAKEFKLNPNAKSFIPSQTPVRPCSPVSDGSFYYPANVSTVPSMPTMPMGVGVGTSFAGPQPIMYNPQVAQMPSQQYFHQNGPQYGQLHGHPRQVLYMPNYLPEAPYKGRY 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03061 510 MobiDBLite consensus disorder prediction 331 364 - -
Car07g03061 510 PANTHER ATAXIN-2 HOMOLOG 1 501 - -
Car07g03061 510 PANTHER ATAXIN 2-RELATED 1 501 IPR045117 GO:0003723
Car07g03061 510 Pfam Ataxin-2 C-terminal region 393 404 IPR009818 -
Car07g03061 510 Coils Coil 138 158 - -
Car07g03061 510 MobiDBLite consensus disorder prediction 336 364 - -
Car07g03061 510 Pfam LsmAD domain 117 186 IPR009604 -
Car07g03061 510 SMART LsmAD_2 117 187 IPR009604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03061 Car-Chr7 57627476 57634315 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03061 - - mtr:MTR_8g019560 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03061 07 57627476 57634315 Car07g03061 07 57627476 57634315 ECH
Car01g02678 01 52298351 52307093 Car07g03061 07 57627476 57634315 PCT