Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02678 ATGAATTTGCAACCCGGACAGTCTAAATCCTCTAATGGATATGGCCGCCGAAAATATGAAAGAGAAGGTGCTGCTAAGTCTGAGAATAAGATCCCATCTGGAAAAATAAATGCCAATAGATTGGCAAGTACAGGTGCAGTTACTGGCTTTAAAGATGGTAGTTATGAGAGTCCTTCACATGATCGACTAGTATATGTAACAACATGCCTAATTGGGCAGCAGGTGGAAGTCCAAGTGAAAAACGGGTCTATATACTCTGGAATTTTTCATGCAACAAACACCGACAAAGATTTTGGGATCATTTTGAAAATGGCTCGTTTGACAAAGGACACTTCACATGGGCAGAAGTCTGGTGCAGAATTTGTCAAGAAGGCTCCTTTAAAGAGTTTAATTATACATGCCAAAGATCTTGTGCAAGTTATAGCACAGGGTGTTGCTGTTACTAGGGATGACCTACCTGGTGAACCTCACCACGACAGGTATCGGGAAATCATGGTTGATTCATTAATATCTCAATCTCATCATGCTGAGCTAGGAAGAGAACTTAAACCCTGGGTACCTGATGAAGATGATCCACAATGCCCTGAACTGGATAATATCTTCGACGGCCACTGGAATAGGGGATGGGATCAGTTTGAAACAAATGAGACATTGTTTGGGGTAAAAAGCACATTCAATGAAGAACTTTATACAACAAAGCTTGAAAAAGGGCCACGGACAAGAGAATTAGAAAAGCAAGCTTTAAAAATTGCTAGAGAAATTGAGGGTGAGGAAACCCGAGATCTTCATCTTGCAGAGGAAAGAGGTCTTCACTTAGATGGACACTTTGATATTGACGAGGAAACTAGATTCTCTTCAGTCTATAGGGGTAAACTTGTTGATGATACATATGAGGAAAATGAAGACATACTGTTGGATTCACACAATTCTGAAACTTTTAGTGGTATATTTGGTTCGGTCGACGAGAGATCGTGTGAAATAAATGGTAGAAAAGGCTATGATGGAGTGCATACATTTGCCAATTCCTACTCCATGGATCAGTCACAGTCATCTCAGTCAACTACTGGTGTAGATTTAAGCCGCTCTAATGCTTATGATCACGCTAGACAGTTAGCGTCCGAAATCCCTTCCAAAAGCTACCCGTCTTCAGATGGGCAAAGCAGAATTATGGAGAACTCGGGTTGCAATCTACATGGAGCCAGTGGTAACACCAAGGAAGAAAATCTTATACAAAGTGAGGATGTTCAACTGTCAAATTATGAGGATTCACAGGCATCACTCTACTTGAAGAAAGATGGCTCTGATAAAGGGGTGTTATCTCCTAATGCCAGCTCCTATGCCCCATCATCTCATATATTAGCAAAGTCTCATGAGAAGATAGGAACACCAAGGGATTCGGCTGAGGGTTTAGCATATGGAAAAGCTAATGGGGAAACAAAGTATTTAAATTCACGTGGGGCATCATATGGGTCAGATTCTGTGAGAGGTGTGGCGGCATCTCGTGGTTCTGGTTTATCTCCAAGttcgtcagttggttcattgtcttctgaaaaatTGTCTTTGAATCCCAATGCAAAGGAATTCAAGCTCAACCCTAATGCAAAGAGTTTTATTCCATCACCTGCTCGGCCTCCCACTCCAGTGTCTGATAGTTCCTTCTATTTTCCAACTACTGTAAATACTGTACCAAATATGCCAGGCGTACCCATGAGTATTGGGGTTGGACCTAATTTTGCTGGGACGCAACCTATCATATATAATCCACAGGTCTCCCAAATGCCAACTCAAGCATATTTTCATCCAAATGCACCGCAGTATGGACAGCTTCTTGGTCATCCTAGGCAAGCTTTATATATGCCGACTTACCTACCTGAAATGCCATACAAGGGACGTGATTATTGA 1902 0.4117 MNLQPGQSKSSNGYGRRKYEREGAAKSENKIPSGKINANRLASTGAVTGFKDGSYESPSHDRLVYVTTCLIGQQVEVQVKNGSIYSGIFHATNTDKDFGIILKMARLTKDTSHGQKSGAEFVKKAPLKSLIIHAKDLVQVIAQGVAVTRDDLPGEPHHDRYREIMVDSLISQSHHAELGRELKPWVPDEDDPQCPELDNIFDGHWNRGWDQFETNETLFGVKSTFNEELYTTKLEKGPRTRELEKQALKIAREIEGEETRDLHLAEERGLHLDGHFDIDEETRFSSVYRGKLVDDTYEENEDILLDSHNSETFSGIFGSVDERSCEINGRKGYDGVHTFANSYSMDQSQSSQSTTGVDLSRSNAYDHARQLASEIPSKSYPSSDGQSRIMENSGCNLHGASGNTKEENLIQSEDVQLSNYEDSQASLYLKKDGSDKGVLSPNASSYAPSSHILAKSHEKIGTPRDSAEGLAYGKANGETKYLNSRGASYGSDSVRGVAASRGSGLSPSSSVGSLSSEKLSLNPNAKEFKLNPNAKSFIPSPARPPTPVSDSSFYFPTTVNTVPNMPGVPMSIGVGPNFAGTQPIIYNPQVSQMPTQAYFHPNAPQYGQLLGHPRQALYMPTYLPEMPYKGRDY 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02678 633 MobiDBLite consensus disorder prediction 502 518 - -
Car01g02678 633 MobiDBLite consensus disorder prediction 1 37 - -
Car01g02678 633 PANTHER ATAXIN-2 HOMOLOG 7 626 - -
Car01g02678 633 PANTHER ATAXIN 2-RELATED 7 626 IPR045117 GO:0003723
Car01g02678 633 Gene3D - 67 133 - -
Car01g02678 633 MobiDBLite consensus disorder prediction 482 518 - -
Car01g02678 633 Pfam LsmAD domain 219 289 IPR009604 -
Car01g02678 633 MobiDBLite consensus disorder prediction 371 403 - -
Car01g02678 633 Pfam Ataxin 2 SM domain 60 142 IPR025852 -
Car01g02678 633 MobiDBLite consensus disorder prediction 14 28 - -
Car01g02678 633 MobiDBLite consensus disorder prediction 375 403 - -
Car01g02678 633 SMART LsmAD_2 219 290 IPR009604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02678 Car-Chr1 52298351 52307093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02678 - - gmx:100812754 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02678 01 52298351 52307093 Car01g02678 01 52298351 52307093 ECH
Car01g02678 01 52298351 52307093 Car07g03061 07 57627476 57634315 PCT