Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02901 ATGATCCATGATGGTGAGAATGGAAATGAGAAAATAGATTATTATGATATGGAGGAGAAAATAGATTATGTGTTTAAGGTGATTGTAATTGGGGATTCAGCAGTAGGAAAGACACAAATACTGTCAAGGTTTTCAAAGAATGAGTTCTGTTTTGACTCTAAGTCAACTATTGGAGTTGAATTTCAAACTAGGACTGTTATTATTAATGGTAAAGTTATCAAAGCTCAGATCTGGGATACTGCTGGCCAAGAAAGGTACAGGGCAGTAACAAGTGCATACTACAGAGGAGCATTAGGGGCCATGTTAGTGTATGACATAACAAAAAGACAATCATTTGATCATGTTGCTAAATGGGTTGAGGAACTAAGATCACATTCAGATAACACCATTGTGATCATGCTAGTTGGTAACAAAGGTGACCTTGTTGACTTGAGAGTTGTTCCTACTGAAGATGCAATTGAGTTTGCTGATGAACAAGGACTATTCTTTTATGAGACTTCAGCTCTCACTGGTGAGAATGTTGAGACTGCATTTATCAAATTGTTTGAAGAGATTAATAGGGTGGTTTGTAAGAAGGCATTGGAATGTGGTAATGGTTACTATGATGCTGCTTCTACAATTAAAGGTTCAAAGATTGATGTAATCTCAGGTGCTGAATTAGAAATTACTGAGATCAAGAAATTGTCTTCTTGCTCTTGTTAA 702 0.3618 MIHDGENGNEKIDYYDMEEKIDYVFKVIVIGDSAVGKTQILSRFSKNEFCFDSKSTIGVEFQTRTVIINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRSHSDNTIVIMLVGNKGDLVDLRVVPTEDAIEFADEQGLFFYETSALTGENVETAFIKLFEEINRVVCKKALECGNGYYDAASTIKGSKIDVISGAELEITEIKKLSSCSC 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02901 233 PANTHER - 9 233 - -
Car07g02901 233 CDD Rab11_like 22 185 - -
Car07g02901 233 SMART rho_sub_3 27 185 IPR001806 GO:0003924|GO:0005525
Car07g02901 233 Pfam Ras family 26 186 IPR001806 GO:0003924|GO:0005525
Car07g02901 233 ProSiteProfiles small GTPase Ras family profile. 19 233 IPR001806 GO:0003924|GO:0005525
Car07g02901 233 ProSiteProfiles small GTPase Rab1 family profile. 20 231 - -
Car07g02901 233 SMART rab_sub_5 25 188 - -
Car07g02901 233 SMART ras_sub_4 22 188 - -
Car07g02901 233 TIGRFAM small_GTP: small GTP-binding protein domain 24 178 IPR005225 GO:0005525
Car07g02901 233 PRINTS Transforming protein P21 ras signature 25 46 - -
Car07g02901 233 PRINTS Transforming protein P21 ras signature 48 64 - -
Car07g02901 233 PRINTS Transforming protein P21 ras signature 66 88 - -
Car07g02901 233 PRINTS Transforming protein P21 ras signature 128 141 - -
Car07g02901 233 PRINTS Transforming protein P21 ras signature 163 185 - -
Car07g02901 233 ProSiteProfiles small GTPase Rho family profile. 17 190 - -
Car07g02901 233 SMART ran_sub_2 30 228 - -
Car07g02901 233 PANTHER RAS-RELATED PROTEIN RABA3 9 233 - -
Car07g02901 233 Gene3D - 17 206 IPR027417 -
Car07g02901 233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 188 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02901 Car-Chr7 55010867 55012392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02901 K07904 - gmx:100799439 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03156 03 76339240 76340329 Car07g02901 07 55010867 55012392 PCT