Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03156 ATGAATCAGGAAATGAATGGGGTGGAAGTTGAAAGGGTAGAAGAGAAAATAGATTATGTGTTTAAGGTTGTGGTGATAGGAGACTCAGCAGTAGGAAAGACTCAAATACTGTCAAGGTTTGCAAAGAATGAGTTCTGCTTTGACTCAAAATCAACCATTGGAGTTGAATTTCAAACTAAAACTGTCACAATAAATGGTAAACTCATCAAAGCACAGATCTGGGATACTGCTGGCCAAGAAAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGAGCATTAGGGGCAATGCTAGTGTACGACATAACTAAAAGACAAACGTTCGATCATGTAGCTAGATGGGTTGAAGAACTTCGATCACACGCTGACACTTCCATTGTGATTATGCTAATTGGTAACAAAGGTGATCTTGTGGATCAAAGAGTGGTACACACCGAATATGCTGTCGAGTTTGCAGAGGATCAAGGCCTCTTTTTCTCTGAGACTTCAGCTTTTACTGGTGAAAATGTCAACTCTGCATTTTTTAAATTGCTTGAAGAGATTAATAAGGTTGTTTCAAAAAGGTCGTTGGACTGTAATAATGGGAAGGCCAATGCTATTATTCATAAAGGATTGGAAATTGATATAATCTCACCTCCTGAATTAGAAATTACTGAATTCAAGAAATTACCTTCATGTTCTTGTTGA 687 0.3814 MNQEMNGVEVERVEEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADTSIVIMLIGNKGDLVDQRVVHTEYAVEFAEDQGLFFSETSAFTGENVNSAFFKLLEEINKVVSKRSLDCNNGKANAIIHKGLEIDIISPPELEITEFKKLPSCSC 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03156 228 ProSiteProfiles small GTPase Rho family profile. 14 185 - -
Car03g03156 228 CDD Rab11_like 18 181 - -
Car03g03156 228 Gene3D - 13 203 IPR027417 -
Car03g03156 228 ProSiteProfiles small GTPase Ras family profile. 15 211 IPR001806 GO:0003924|GO:0005525
Car03g03156 228 PANTHER - 1 228 - -
Car03g03156 228 TIGRFAM small_GTP: small GTP-binding protein domain 20 174 IPR005225 GO:0005525
Car03g03156 228 ProSiteProfiles small GTPase Rab1 family profile. 16 226 - -
Car03g03156 228 Pfam Ras family 22 182 IPR001806 GO:0003924|GO:0005525
Car03g03156 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 188 IPR027417 -
Car03g03156 228 PANTHER RAS-RELATED PROTEIN RABA3 1 228 - -
Car03g03156 228 SMART ras_sub_4 18 184 - -
Car03g03156 228 SMART ran_sub_2 26 228 - -
Car03g03156 228 SMART arf_sub_2 6 185 - -
Car03g03156 228 SMART rab_sub_5 21 184 - -
Car03g03156 228 PRINTS Transforming protein P21 ras signature 21 42 - -
Car03g03156 228 PRINTS Transforming protein P21 ras signature 44 60 - -
Car03g03156 228 PRINTS Transforming protein P21 ras signature 62 84 - -
Car03g03156 228 PRINTS Transforming protein P21 ras signature 124 137 - -
Car03g03156 228 PRINTS Transforming protein P21 ras signature 159 181 - -
Car03g03156 228 SMART rho_sub_3 23 187 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03156 Car-Chr3 76339240 76340329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03156 K07904 - gmx:100787725 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03156 03 76339240 76340329 Car07g02901 07 55010867 55012392 PCT