Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02873 ATGTCTTCTGCTGGTGTTACAACTCTTAGCCCTGTTTCAAGGGAGACATTGTTGTTTCCAAATGGATTCTGTAATCCACTCCACTTGTCTATGGATCACGACTTTATTTTCGTGTATCTTTCTTATTCGGGGTCGTTGTCTCCGTTGCGTGTTTTACCCTCGGATACGATTGAATCGGTGAAACTCAAAATCCAAAGGAACGAGGGTGTTCCTTCGTTGACGAACAAACAGAAGTTGGTTTGTAATGGTCGTGAGTTATCGCGTAGTAATTCATTGCTTAAGGATTATGGGGTTACAGAAGGGAATGTGTTGCATTTGGTGATAAGACTTACTGATCTTCAGACTATCAGTGTGAGAACTTGTTCTGGGAAGGAGTTTACCTTTCAGGTTGAGAGGTGTAGGGATGTTGGGTATGTTAAGCAACAGATTGCGAAAAAGGAGAAACAGTTTGCTGATCCTGAACAGCAGGAAGTTGTGTGTAATGGTGAACTGCTTGATGATCAGAAGCTAATTGATGATGTCTGTAGCAAATATAATGATGCAGTGTTACATCTTTTTGTTAGAACGAAATATGCGGATGTTGAGGCAGGACTGGATGAGTTGTCCATTGCAGCTAAGGAATTGAATGCTACAAAGAGTTATGATGCTAATGAAACTTCTGAAAGGGATTATGTGAGGAAATATGATGTTAGTAAAGAAGATGCGAAGAGGGAGTATGAAGCAATTGAGCGAATTATATCGAGAAAAGCTCTTGATAGAGGTCTTCTTTTGGAGCCAGTTATTGTTAACCCTAAAGTTGAATTAGCTTCGGATGTTTGGGATATGATAAACTCTACATGTGATGGGCTAGAGAGTGGAAATTCTCCAATCAGATCTGCAGAGGGCACAGGAGGGGCCTACTTTATGCTAGATTCTACAGGGCAAAAGTATGTATCTGTTTTTAAGCCTATTGATGAAGAACCAATGGCTATGAATAACCCTAGAGGTTTACCTTTGTCATCAGATGGCGAGGGCTTAAAAAAGGGTACAAGAGTTGGCCAAGGAGCTTTCAGGGAAGTTGCTGCTTATATTTTGGACCATCCAATGAGTGGCCGTCGATCATTATTTGGTGACGAGAAGGGTTTTTCTGGGGTTCCCCCGACTGTTATGACAAAGTGCTTGCATAAAGGATTTAATCATCCAGGGGCTTTGACTGCTAAGATCGGTTCCTTGCAAATGTTTGTGGAGAACAATGGAAGTTGTGAGGATATGGGACCTGGTGCTTTCCCTGTGAAGGAAGTGCATAAAATTACTGTGCTGGACATAAGACTGGCTAATGCAGATCGGCATGCTGGGAATATTTTGCTTGGCAGAGAGAAGGAAAATGACCAGGCTGTTTTGATTCCAATTGATCATGGATACTGCCTCCCCACTAGTTTTGAAGATTGTACCTTTGAATGGCTTTATTGGCCTCAAGCTCGCCAGCCATACTCCCAAGAGACCGTTGACTACATAATGTCCCTGGACGCTGAAGAAGATATTGCCCTTCTGAAGTTTCATGGATGGGATCTGCCGCTCGAATGCACCCGCACTCTCCGAATCTCAACCATGCTTCTGAAAAAAGGAGTGGATAGAGGGATGACCCCTTTTTCCATTGGGAGCCTTATGTGCCGCGAATCCTTGCACAAGGAGTCTGTGATTGAAGGAATTGTAAAAGCAGCACTGGATTCTGTTCTCCCAGGTACTAGTGAAGCTACTTTTATGGAGTCTGTTTCCGACATTATGGACCAGCACCTTGATGAGATCACCAGCAGttttaattcttag 1806 0.428 MSSAGVTTLSPVSRETLLFPNGFCNPLHLSMDHDFIFVYLSYSGSLSPLRVLPSDTIESVKLKIQRNEGVPSLTNKQKLVCNGRELSRSNSLLKDYGVTEGNVLHLVIRLTDLQTISVRTCSGKEFTFQVERCRDVGYVKQQIAKKEKQFADPEQQEVVCNGELLDDQKLIDDVCSKYNDAVLHLFVRTKYADVEAGLDELSIAAKELNATKSYDANETSERDYVRKYDVSKEDAKREYEAIERIISRKALDRGLLLEPVIVNPKVELASDVWDMINSTCDGLESGNSPIRSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAMNNPRGLPLSSDGEGLKKGTRVGQGAFREVAAYILDHPMSGRRSLFGDEKGFSGVPPTVMTKCLHKGFNHPGALTAKIGSLQMFVENNGSCEDMGPGAFPVKEVHKITVLDIRLANADRHAGNILLGREKENDQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSQETVDYIMSLDAEEDIALLKFHGWDLPLECTRTLRISTMLLKKGVDRGMTPFSIGSLMCRESLHKESVIEGIVKAALDSVLPGTSEATFMESVSDIMDQHLDEITSSFNS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02873 601 ProSiteProfiles Ubiquitin domain profile. 114 173 IPR000626 GO:0005515
Car07g02873 601 ProSiteProfiles Ubiquitin domain profile. 36 109 IPR000626 GO:0005515
Car07g02873 601 CDD Ubl_ubiquitin_like 116 186 - -
Car07g02873 601 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 286 579 IPR000403 -
Car07g02873 601 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 599 - -
Car07g02873 601 SUPERFAMILY Protein kinase-like (PK-like) 436 597 IPR011009 -
Car07g02873 601 SUPERFAMILY Ubiquitin-like 32 111 IPR029071 -
Car07g02873 601 Pfam Ubiquitin family 42 110 IPR000626 GO:0005515
Car07g02873 601 Pfam Ubiquitin family 116 189 IPR000626 GO:0005515
Car07g02873 601 Pfam Phosphatidylinositol 3- and 4-kinase 295 545 IPR000403 -
Car07g02873 601 Gene3D - 31 114 - -
Car07g02873 601 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 599 IPR044571 -
Car07g02873 601 SMART ubq_7 36 109 IPR000626 GO:0005515
Car07g02873 601 SMART ubq_7 114 188 IPR000626 GO:0005515
Car07g02873 601 Gene3D - 115 195 - -
Car07g02873 601 SUPERFAMILY Ubiquitin-like 111 189 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02873 Car-Chr7 54614050 54617605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02873 1 594 Acyl Lipid Metabolism Gene Families AT5G24240 55.426 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02873 - - gmx:100815111 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03136 03 76200682 76203717 Car07g02873 07 54614050 54617605 PCT