Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03136 ATGTCATCTGCTGGTGTTACCACTCTTAGTCCTGTTCCTAATGAGCCATTGTTGTCTCCAAAAGCATTTCATTTTCCATCTCACTTGTGTTTGGAAGACAAATCCATTTTCATATTTCTCTCATTTTCGGGTTCGTTGACTCCTATTCGTGTTATGGAATGGGATACTATTGAGTCTGTTAAATTCAAAATCCAAAGGTGTGAGAGTCTTCCGTTTTTAACTAACAAACAGAAGTTGGTTTATGCCGGTCGAGAACTTTCTCGAAGTGATACTCTACTCAAGGACTATGGAGTAACAGATGGAAATGTTTTGCATTTGATAATCAAACTCTCAGATCTCCAGCTCATCAATGTGAAAACGTCTTCTGGGAAAGAATTCTCTTTTCAGGTGGAAAGAGGTAGGGATGTCGGGTACATCAAGCGACGGATTGCTAAAAAGGAAAAACAATTTGACAATATTGAGCAGCAGGAACTTGTGTGTAATGGTGAACGGTTGGAGGATCAGAAGCTTATTGATGATATCTGCGGCAAGCATAATGATGCAGTGGTGCATCTTTTTGTCAGAAAGAGGCATGCGAAAGTTCATAGACGACCCCTCGAGTTGTCCATTGTAGCAACAGACTTGGCTGATAACAAAACTAAAGATGTTTGCGGAAATTCTCTTGAGAGAAAATTTGAAGCTGGTTATACTGATGTCATTCAAAAAGTGGTGCCAAGAAAGCCTCCTGAGAGAGATTTTCTTTTGGAGCCGATTATAGTTAACCCTAAAATTGAGTTAGCTTCAGCAATTCAGAATATGGTAAACTCTACATACGGTGGGTTAGCTAATGAAAACTATCCAATAGGATCTGCTGAGGGTACAGGAGGAGCTTACTTTATGCTTGATTCAGCTGGTCAGAAGTATGTTTCTGTTTTTAAGCCTATTGATGAAGAACCAATGGCTGTGAATAATCCTCGAGGTCTTCCATTATCGTTAAATGGCGAAGGCTTAAAAAAGGGTACAAGAGTTGGTCAAGGAGCATTCAGAGAGGTTGCGGCTTATGTTTTGGATCATCCAATAAGTGGACGCCGCAAGTTATTCGGTGATGTGAAGGGTTTTGCCGGCGTTCCTCCAACATTGATGGTCAAGTGCTTGCATAAAGGATTTAATCACCCGGGAGACTTGATTGCTAAGATTGGATCCATGCAGATGTTTGTGAAAAATAATGGAAGCTGTGAAGATATTGGTCCTGGGGCTTTCCCGGTAAAAGAAGTACACAAAATTACTGTTCTTGACATAAGACTGGCGAATGCAGATAGGCATGCTGGGAATATTTTGTTCAGCACAGAGGAGGGTAGTGACCAGTCTGTTCTGGTTCCAATTGATCATGGCTACTGCTTACCAACAAGTTTTGAAGATTGTACCTTTGAATGGCTTTACTGGCCCCAAGCCCGCAAGCCATATTCCCCGGAAACTATCGAGTACATAAAGTCACTGGATGCTGAAGAAGATATTGCTCTTTTGAAGTTTCATGGATGGGATCTGCCAATTGAATGTGCCCGCACTCTTAGAATCTCAACCATGCTTTTGAAGAAAGGGGTTGAAAGAGGATTGACACCTTATGCCATTGGAAACCTTATGTGCAGGGAATCATTGAACAAGGAATCTGTGATAGAGGAAATAGTTGAAGAATCACTGGAATCTGTACTTCCTGGCACGAGTGAAGCTACATTGCTGGATTCCGTTTCACAAATCATGGACCGGCGCCTCGATAAGATTTTCAACTCTCTTTTTTAA 1776 0.4139 MSSAGVTTLSPVPNEPLLSPKAFHFPSHLCLEDKSIFIFLSFSGSLTPIRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELSRSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVGYIKRRIAKKEKQFDNIEQQELVCNGERLEDQKLIDDICGKHNDAVVHLFVRKRHAKVHRRPLELSIVATDLADNKTKDVCGNSLERKFEAGYTDVIQKVVPRKPPERDFLLEPIIVNPKIELASAIQNMVNSTYGGLANENYPIGSAEGTGGAYFMLDSAGQKYVSVFKPIDEEPMAVNNPRGLPLSLNGEGLKKGTRVGQGAFREVAAYVLDHPISGRRKLFGDVKGFAGVPPTLMVKCLHKGFNHPGDLIAKIGSMQMFVKNNGSCEDIGPGAFPVKEVHKITVLDIRLANADRHAGNILFSTEEGSDQSVLVPIDHGYCLPTSFEDCTFEWLYWPQARKPYSPETIEYIKSLDAEEDIALLKFHGWDLPIECARTLRISTMLLKKGVERGLTPYAIGNLMCRESLNKESVIEEIVEESLESVLPGTSEATLLDSVSQIMDRRLDKIFNSLF 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03136 591 CDD Ubl_ubiquitin_like 116 186 - -
Car03g03136 591 ProSiteProfiles Ubiquitin domain profile. 116 192 IPR000626 GO:0005515
Car03g03136 591 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 589 IPR044571 -
Car03g03136 591 SMART ubq_7 114 188 IPR000626 GO:0005515
Car03g03136 591 SMART ubq_7 36 109 IPR000626 GO:0005515
Car03g03136 591 SUPERFAMILY Ubiquitin-like 30 110 IPR029071 -
Car03g03136 591 SUPERFAMILY Protein kinase-like (PK-like) 424 587 IPR011009 -
Car03g03136 591 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 277 570 IPR000403 -
Car03g03136 591 Pfam Phosphatidylinositol 3- and 4-kinase 286 535 IPR000403 -
Car03g03136 591 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 589 - -
Car03g03136 591 Gene3D - 115 200 - -
Car03g03136 591 Pfam Ubiquitin family 116 190 IPR000626 GO:0005515
Car03g03136 591 Pfam Ubiquitin family 38 110 IPR000626 GO:0005515
Car03g03136 591 Gene3D - 31 114 - -
Car03g03136 591 ProSiteProfiles Ubiquitin domain profile. 55 109 IPR000626 GO:0005515
Car03g03136 591 SUPERFAMILY Ubiquitin-like 108 192 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03136 Car-Chr3 76200682 76203717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03136 33 585 Acyl Lipid Metabolism Gene Families AT5G24240 55.080 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03136 - - gmx:100791631 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03136 03 76200682 76203717 Car07g02873 07 54614050 54617605 PCT