Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02850 ATGAGGGAGAATGTTGAAGCATTTGACATGAAGAAAGTGATAGAAAATTTTGAAAGGATAACAAAAGATGCTGAAAATGTTCAAAAGGAAACACTGAAAAGGATATTGGAAGAAAATGCATCTGCTGAATACTTGCAAAAATTTGAACTGAATGGTAGAACTGATCCTGAAAGTTTCAAGTCATGTGTTCCACTTATCACTTACAAAGATGTGGAACCTTATATTGATAGAATTGTTGATGGTGAACTTTCTTCTATTATCACTGCAAAACCAATCAGAGCATTTTCCTTAAGTTCTGGTACTAGTCAAGGGAGACAAAAACGTTTACCATGGAATGATGAATTGTTTGTAAACACAGTTCACACATTTCAAACCGCTTTTGCATATAGGAACAGATATATTCCTACAGATGTGAATGGTAAGGGGTTAAACTTTATCTACAGCAGCAGCAAACTACCAGAAACAAAAGATGGTATAATACTTGCAACAGCAACAGGCCATATCTACAGACATCCAGAATACAAGAAAACTATGAAAGAAATTCATTCTTCATCTTGCAGTCCTGATGGTGTCATTTTCAGTCCTGATTTTCACCAATCTCTTTACTGCCACCTCTTGTGTGGTCTCATTTTCAGAGAACAAATTCAGTTTATTTCTGCTATTTTTGCACACAGCATTCTCTATGCTTTCAGAAACTTTGAACAAATTTGGGAAGAACTTTGCAATGATATCAAACAAGGTGTTCTAAGCAGCAGAATCACTGTTCCATCCATCAGAACTGCTATGTCAGAAATTCTTAAACCTGATCCTGAACTAGCCAACTTGATTCATACCAAGTGCTTGAATTTAAGCAATGATTGGTATGGTTTGATACCAGAGCTATTTCCTAATATTAAGTATGTTCAAGGGATTATGACAGGTGTTATGGAACCTTATGTGAAAAAGCTGAGGCATTATGCTGGAGATGTTCCTTTGTTGACTACTGAGTATGGAGCTTCTGAAGGGTGGGTTGCATCAAATGTCAATCCTCAAATTCCTCTTGAATTGGCTACTTATGTTGTTCTTCCTCAAATTGGTTTCTTTGAATTTATTCCTATGGCACAACTGGATGGAACTCAGGGAGATATTAAGCCAGTTGGCTTAACTGAAGTTAAGATTGGTGAAGAGTATGAGGTTGTTTTGACCAATCCTGCAGGCTTATATAGGTATATACTAGGAGATGTGGTAAAGATAATGGGGTTCTATAACTCAACTCCAGAACTGAAGTTTATTCGCAGGAGGAATGTTTTGCTTACAATAAACCTTGATAAGAACACAGAAACTGATCTGCAAATATCAGTGGACACAGCAGCCAAATATTTACTAGAGGAGAAAATGGAAGTGGTTGACTACACTAGCTACATTGATTTATCCAAAGAACCAGGACACTATGTTATCTTCTTAGAAATCAGCGGCGAACCGACCGATGAACTTCTCGCCAAATGCTGCAATTGTTTGGACAAGTCTTTACCTGAACTTGGCTACATTAGTTCCAGAAAAGTTAAGGGTATTGATCCACTTGAACTCCGAGTTGTTAAGAAAGGAACATTTCACAAGATTCTTGAGCATTTTGTTAGTTTGGGTAGAAGTGCGAGTCAATTCAAGACACCTAGGTGTGTTGGTCCTACAAACACTGACATGTTGCAAATATTGAGTGATAATGTTGTCAACAACTATTTTAGCTCTGCTTACAATTGA 1737 0.3708 MRENVEAFDMKKVIENFERITKDAENVQKETLKRILEENASAEYLQKFELNGRTDPESFKSCVPLITYKDVEPYIDRIVDGELSSIITAKPIRAFSLSSGTSQGRQKRLPWNDELFVNTVHTFQTAFAYRNRYIPTDVNGKGLNFIYSSSKLPETKDGIILATATGHIYRHPEYKKTMKEIHSSSCSPDGVIFSPDFHQSLYCHLLCGLIFREQIQFISAIFAHSILYAFRNFEQIWEELCNDIKQGVLSSRITVPSIRTAMSEILKPDPELANLIHTKCLNLSNDWYGLIPELFPNIKYVQGIMTGVMEPYVKKLRHYAGDVPLLTTEYGASEGWVASNVNPQIPLELATYVVLPQIGFFEFIPMAQLDGTQGDIKPVGLTEVKIGEEYEVVLTNPAGLYRYILGDVVKIMGFYNSTPELKFIRRRNVLLTINLDKNTETDLQISVDTAAKYLLEEKMEVVDYTSYIDLSKEPGHYVIFLEISGEPTDELLAKCCNCLDKSLPELGYISSRKVKGIDPLELRVVKKGTFHKILEHFVSLGRSASQFKTPRCVGPTNTDMLQILSDNVVNNYFSSAYN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02850 578 Coils Coil 10 30 - -
Car07g02850 578 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 578 - -
Car07g02850 578 Pfam GH3 auxin-responsive promoter 17 553 IPR004993 -
Car07g02850 578 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 578 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02850 Car-Chr7 54163956 54168742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02850 9 575 EF-hand Containing Proteins AT1G23160 38.382 5.34e-133 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02850 K14506 - gmx:100813492 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03124 03 76104308 76109657 Car07g02850 07 54163956 54168742 PCT