Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03124 ATGTTATTAGAGAAAGTGGAAGAGTTTAACATGGACAAATTTATAGAAGATTTTGAGTCAATGACTAAAGATACAGAAAGGGTTCAGAAGGAAACACTCAAAAGAATTTTGGAAGATAATGCATCAGCTGAATATTTGCAGAATTTGGGTCTCAATGGAAGAACTGACCCTGAAAGTTTCAAAGCTTGTGTTCCACTTGTTACACACAAAGATTTGGAACCTTATATCTATAGAATTCTTGATGGTGATGCTTCTCCTATTCTTACTGGAAAATCCATTACTACTATGTCTTTAAGTTCTGGTACTACTCAGGGGAAGCCAAAATATATACCATGGAATGATGAATTGTTTGAAACCACAATGCAGATATATCAGACATCTTTTGCCTTTAGGAACAGAGAGTTTCCTATAAAAAATGGAAAAGCCTTAAACTTCATATATGGAAGCAAACAGTCGAAAACAAGAGGTGGTCTGATAGCAACAACAGCTACAAGTAACGTGTTTCGCAATCCACATTACAAACGCACAATGAAAGCACTTCAATCCCAATGTTGCAGTCCAGATGAAGTTATATTCGGTTCTGATTTTTTTCAATCATTATATTGCCATCTACTATGTGGACTAATTTTCCGTGAAGAAGTTCAATTAGTATCTTCAACATTTGCACATAGCATTGTCCATGCTTTCAGAACATTTGAACAAGTTTGGGAAGAGCTTTGTAATGATATAAAACAAGGTGTTCTTACTAGCCGAATCACGGTTCCATCGATTCGAATGGCTATGTCGAAAATACTGAAACCAAATCCAGAACTAGCTAACATTATACACAAAAAATGTTTAGGATTGAGTGGTTGGTATGGTTTGATACCTGAGATATTTCCTAATGCAAAGTATATTTATGGCATTATGACTGGTTCTATGGAACCATATTTGGAAAAGTTAAGACACTATGCAGGGGTGTTACCTTTGTTAACTGCTGATTATGGTGCTTCTGAAGGGTGGATAGCTTCAAATGTTAATCCAAAAGTTCCACCTGAATTGGCTACTTATGCTGTGCTTCCTCAAATTGGTTACTTTGAGTTCATTCCTCTTACACAGGGTGATAATCAAGATACTTTTCTTTCTGTTGATCCTAAGCCACTTGGACTCACTGAGGTCAAAATTGGTCAAGAGTATGAAATTGTTATGACCAATCCTGCTGGTTTATATCGGTACAGAGTAGGGGATGTGGTAAAGGTTATGGGATTCCATAACTCAACTCCAGAATTAAAGTTTATTCGTAGGAGTAGTCTGCTACTAAATATCAACATTGACAAAAACACAGAAAAAGATTTACAATTAGCTGTTGAAGCAGCAGGAAAATTATTAGCAGAAGAAAAAATAGAAGTTGTTGAGTTTACAAGTCATGTTGATTTATCAAAAGAGCCAGGAAACTATGTAATATTTTGGGAAATAAGTGGAGAAGCAAGTGAAGAAGTGCTTGGTGAATGTTGCAATTGTTTGGACAAATCTTTTATTGATGCAGGTTACACAAGTTCTCGTAAAGTAAACAATATTGGTGCCTTAGAACTCCGAGTAGTTAGGAAAGGAACATTTCAGAAGATTCTTGATCATTATCTTGGATTAGGAACAGCTCTTAGTCAGTATAAGACACCAAGATGTGTAGGTCCTACAAATAATGTTGTCTTGCAAATCTTGACTGAAAATGTTGTCAACAATTTTCTTAGTACTGCATTTAATTGA 1743 0.3551 MLLEKVEEFNMDKFIEDFESMTKDTERVQKETLKRILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHKDLEPYIYRILDGDASPILTGKSITTMSLSSGTTQGKPKYIPWNDELFETTMQIYQTSFAFRNREFPIKNGKALNFIYGSKQSKTRGGLIATTATSNVFRNPHYKRTMKALQSQCCSPDEVIFGSDFFQSLYCHLLCGLIFREEVQLVSSTFAHSIVHAFRTFEQVWEELCNDIKQGVLTSRITVPSIRMAMSKILKPNPELANIIHKKCLGLSGWYGLIPEIFPNAKYIYGIMTGSMEPYLEKLRHYAGVLPLLTADYGASEGWIASNVNPKVPPELATYAVLPQIGYFEFIPLTQGDNQDTFLSVDPKPLGLTEVKIGQEYEIVMTNPAGLYRYRVGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAGKLLAEEKIEVVEFTSHVDLSKEPGNYVIFWEISGEASEEVLGECCNCLDKSFIDAGYTSSRKVNNIGALELRVVRKGTFQKILDHYLGLGTALSQYKTPRCVGPTNNVVLQILTENVVNNFLSTAFN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03124 580 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 3 580 - -
Car03g03124 580 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 3 580 IPR004993 -
Car03g03124 580 Pfam GH3 auxin-responsive promoter 18 555 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03124 Car-Chr3 76104308 76109657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03124 18 577 EF-hand Containing Proteins AT1G23160 38.783 6.69e-135 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03124 K14506 - gmx:100794598 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03124 03 76104308 76109657 Car07g02850 07 54163956 54168742 PCT