Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02758 ATGTCAGAAACTGACATGGCAATTATTAAACCTGAGATGATGAAGCCTTATGTGTGGCTTCAAACATCCGGTGATTCAATCCAACAAGTGGAACAAGAGATTGCGATGTTTTGCCCATTTATATGTCAAGAAATAATACAAAAAGGAACGGGATCTTCCAAGAATTGTGCAATATGTCTTCCTCAACAAGTCAGTCCTGCAATGTTGAGCTTAATTCTTGATTATTGTCGATTTCATCAAGTACCAGGCCGCTCAAACAAGGAACGGAAGTCTTATGATGAGAAATTTGTTAGGATAGACACAGGGAAGCTCTGTGAGTTGACGTCTGCTGCAGACAGCCTTCAGTTAAAGCCATTGGTTGATCTTACTAGTCGTGCACTAGCTCGAATAATTGAAGGAAAATCACCGGAGGAGATACGTGACATATTTCATTTGCCTGATGATCTTACAGAGGAAGAGAAATTGGAGCCTTTGCGAAACATAACTGACGACCCAAGGATCAGGCTTTTGAACCGCTTGTATGCCAAGAAGAGGAAAGAACTTAAAGAACGTGAAAGGATAAAGAATGTTGAAGTTGAAGAAGAGCATGTAGATGAGCGTTCAGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGGAGATCCAAAGGAGATTAAAACTTCCAAGAATAAAAAGAAGAACCGAAGGAAAAAAGACCAACAAAAGAATTCTTCTTTGCAGGAAACATCTGTTCCACTTGATAAGGTTCAGGAGGTAAACGGTCTTAACATTAGACACCAAAGTTCAGAAGCTGATAGACCCTGTGAGTCCTCAAATTTACACCATACAGACGATAGTCCTATGGATGAGTTTGATGATGGTGATATAGACGATGAGATTGATCCGGCATTAAAAGCAAAAATCGACAGGGAAGTGGAAGATTTTGCCCGCAGATTAAATTCTGACTGGCCGGAGAGAATGCAAGACTTTTTGAAGTCAGCGCAAGAAAGGAAGACAATGCTTTTTACCACCAACGGGGATGGACTGGACTTTCAGAATGGAAATGAATCCTCAGATGGCCATTGGCTTGAAAATTTTGAGATGCTGGCAAGCACAAGAGAAGTGTTGTATATGAACTTCCTTACAGTTTCACACGGTAAACAGCGATCTCAACCATTAATTTGA 1167 0.4019 MSETDMAIIKPEMMKPYVWLQTSGDSIQQVEQEIAMFCPFICQEIIQKGTGSSKNCAICLPQQVSPAMLSLILDYCRFHQVPGRSNKERKSYDEKFVRIDTGKLCELTSAADSLQLKPLVDLTSRALARIIEGKSPEEIRDIFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYAKKRKELKERERIKNVEVEEEHVDERSVDDLLSFINGNDGDPKEIKTSKNKKKNRRKKDQQKNSSLQETSVPLDKVQEVNGLNIRHQSSEADRPCESSNLHHTDDSPMDEFDDGDIDDEIDPALKAKIDREVEDFARRLNSDWPERMQDFLKSAQERKTMLFTTNGDGLDFQNGNESSDGHWLENFEMLASTREVLYMNFLTVSHGKQRSQPLI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02758 388 Gene3D Potassium Channel Kv1.1; Chain A 12 161 IPR011333 -
Car07g02758 388 SMART skp1_3 15 116 IPR001232 GO:0006511
Car07g02758 388 MobiDBLite consensus disorder prediction 238 261 - -
Car07g02758 388 PANTHER SKP1 1 279 IPR016897 GO:0006511
Car07g02758 388 SUPERFAMILY Skp1 dimerisation domain-like 90 159 IPR036296 GO:0006511
Car07g02758 388 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Car07g02758 388 Coils Coil 223 243 - -
Car07g02758 388 MobiDBLite consensus disorder prediction 207 285 - -
Car07g02758 388 PANTHER SKP1-LIKE PROTEIN 20 1 279 - -
Car07g02758 388 SUPERFAMILY POZ domain 16 80 IPR011333 -
Car07g02758 388 MobiDBLite consensus disorder prediction 263 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02758 Car-Chr7 52893693 52903560 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02758 - - gmx:100794666 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01556 03 61230623 61236927 Car07g02758 07 52893693 52903560 PCT