Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02717 ATGGGAGTAGAAGCTACACAAAGGTATGCAGTGGTGACAGGGGCAAACAAAGGAATTGGAGTTGAGATAGTAAGACAGTTAGCTTTATCTGGAATCAAAGTTGTGCTTACAGCAAGAGATGAAAAAAGGGGTCTTCAAGCATTGGAAACACTCAAAGCTTCTGGTTTATCTGATTTTGTCGTGTTTCATCAAGTAGATGTGGCTAATGCTGCAAGTATAGCTACTCTTGCAGATTTTGTCAAATCCAAATTTGGCAAACTTGACATTCTGGTTAACAATGCAGGGATTAGTGGAACTGTAATTAATGACAAAGATTTAGCACGTTTGCTTATCATTAACCCTGGAGCACTGTCAGAAGATGAAAAGAAAAAGGCAATGACTCAAACATATGAGTTAGCTGAAGAATGCTTGCAAATAAATTATTATGGTGCTAAAATAACTACTCAATCACTTCTTCCACTTCTTCAGTTATCTGATTCACCAAAAATTGTGAATGTATCATCAACTCTTGGAAAGTTAGAGAGCATGCCAAATGAATGGGCTAAAAATATCTTTAGTGATGTTGATAACTTAACTGAAGAAAAAGTGGATGAAGTATTGAAGAAGTTTCTAGAAGATTTCAAAGAAGGTTCATTGGAAAGCAAAGGGTGGCCTAAAGTTGGGGGTGCTTATATCTTATCTAAAGCTGCTATGAATGCATATACAAGAATTGTTGCTAAGAAATTTCCAACTTTATGCATCAATAGTATCTGTCCTGGTTTTGTCATCACAGATATTACTGCTAATACCGGTATGTTAACGGCTGAAGAAGGTGCTGCTAGCATTGTGAAGCTAGCATTACTTCCCAATGGTAGTTTATCTGGCCAATTCTATAACAGGACTGAATTTGAAATTCAAACATCAAAGGTAAAACTGAAGATAAAGGTAAAACTGAAGATGGGAGAATCTGCAGAAAGGTATGCAGTTGTGACAGGAGCAAACAAAGGAATTGGATTTGAGATAGTAAGACAGTTAGCTTCATCTGGAATCAAAGTTGTGCTTACAGCAAGAGATGAGAAAAGGGGTCTTCAAGCATTGGAAACACTTAAAGCTTCTGGTTTATCTGATTTTGTTTTGTTTCATCAACTAGATGTTGCTAATGCTGCAAGTGTAGCTACTCTTGCTGATTTTGTCAAATCCAAATTTGGGAAACTTGATATTCTGGTTAACAATGCAGGGATAACTGGAACTATAATTAATGACAAAGAACTATTTACTTTGGCTATCTACAACCGTGGGGCATTATCAGAAGATGATAGGAGAAAGGGATTGACTCAAACATATAAGTTGGCTGAAGAATGCTTGCAAATAAATTATTATGGTGCTAAATTAACTACTCAATCACTTCTTCCCCTCCTTAAGTTATCTGACTCACCAAGAATTGTGAATGTATCATCCACTTTGGGGCAGTTTGAGCACATATCAAATGATTGGGCACATAGTGTATTAGATGATACTGAAAATCTGAATGAAGAGCTAATAGATAAGGTACTCAAAGAATTTATGAAAGACTTCAAACAAGGTTCACTTGAAAACAAGGGATGGCCAATTTTCCTTTCAGCCTATAAACTCTCAAAAGCTGCTGTGAATTCCTACACAAGACTTCTAGCTTATAGACATAAAAACTTGTGTATAAATTGTGTTTGTCCTGGTTTTGTTAAAACAGACATGAATAGAAACACAGGTAAATTGTCTGTTGAAAATGGTGCTGCTAGTGTTGTTAGATTAGCATTACTTCCTAGTGGTTCACCTTCTGGTCACTTCTTTGCTCGCCATGATTTGTCAACTTTTTGA 1833 0.3633 MGVEATQRYAVVTGANKGIGVEIVRQLALSGIKVVLTARDEKRGLQALETLKASGLSDFVVFHQVDVANAASIATLADFVKSKFGKLDILVNNAGISGTVINDKDLARLLIINPGALSEDEKKKAMTQTYELAEECLQINYYGAKITTQSLLPLLQLSDSPKIVNVSSTLGKLESMPNEWAKNIFSDVDNLTEEKVDEVLKKFLEDFKEGSLESKGWPKVGGAYILSKAAMNAYTRIVAKKFPTLCINSICPGFVITDITANTGMLTAEEGAASIVKLALLPNGSLSGQFYNRTEFEIQTSKVKLKIKVKLKMGESAERYAVVTGANKGIGFEIVRQLASSGIKVVLTARDEKRGLQALETLKASGLSDFVLFHQLDVANAASVATLADFVKSKFGKLDILVNNAGITGTIINDKELFTLAIYNRGALSEDDRRKGLTQTYKLAEECLQINYYGAKLTTQSLLPLLKLSDSPRIVNVSSTLGQFEHISNDWAHSVLDDTENLNEELIDKVLKEFMKDFKQGSLENKGWPIFLSAYKLSKAAVNSYTRLLAYRHKNLCINCVCPGFVKTDMNRNTGKLSVENGAASVVRLALLPSGSPSGHFFARHDLSTF 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02717 610 Pfam short chain dehydrogenase 531 574 IPR002347 -
Car07g02717 610 Pfam short chain dehydrogenase 320 485 IPR002347 -
Car07g02717 610 Pfam short chain dehydrogenase 9 173 IPR002347 -
Car07g02717 610 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 8 295 - -
Car07g02717 610 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 319 609 - -
Car07g02717 610 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 8 295 - -
Car07g02717 610 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 319 609 - -
Car07g02717 610 PRINTS Glucose/ribitol dehydrogenase family signature 396 407 IPR002347 -
Car07g02717 610 PRINTS Glucose/ribitol dehydrogenase family signature 535 554 IPR002347 -
Car07g02717 610 PRINTS Glucose/ribitol dehydrogenase family signature 466 482 IPR002347 -
Car07g02717 610 PRINTS Glucose/ribitol dehydrogenase family signature 554 571 IPR002347 -
Car07g02717 610 PRINTS Glucose/ribitol dehydrogenase family signature 320 337 IPR002347 -
Car07g02717 610 CDD carb_red_PTCR-like_SDR_c 319 602 IPR045313 GO:0016616
Car07g02717 610 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 IPR002347 -
Car07g02717 610 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 IPR002347 -
Car07g02717 610 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 243 IPR002347 -
Car07g02717 610 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 319 596 IPR036291 -
Car07g02717 610 Gene3D - 311 610 - -
Car07g02717 610 Gene3D - 3 298 - -
Car07g02717 610 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 290 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02717 Car-Chr7 52257641 52287313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02717 322 576 Acyl Lipid Metabolism Gene Families AT1G24360 24.806 6.25e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02717 K15095 - sind:105174340 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01523 03 60773168 60776623 Car07g02717 07 52257641 52287313 PCT