Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01523 ATGGCTGAAAAGTGTCTAAGAACAAACTACTATGGTGTTAAGGAAACAACTGAGTCATTTCTTCCCCTTCTCCATTTATCCAATTCTCCCAAGATTGTTAATGTTTCCTCCCAAGCAGGGTTATTAAAGAATATACCAAACCAAAGGGCTAAAAGGGTATTTGATGATGTTGAAAATCTTAAAGAAGAAAGAATAGATGAGGTACTTCAAGAGTTTATCAAAGACTTCAAAGAAGGTTCACTAGAAAACAAAGGGTGGCCAACCATAATGTCTGCATATATAGTCTCAAAAGCAGCAATTAATTCTTACACAAGGATTTTAGCTAAGAAACATCCAAACTTTTACATCAACTGTGTGTGTCCTGGTTTTGTCAAAACAGACATCAACAGAAACACTGGCATGTTATCTGTTGACCAAGGTGCTGCTAGTGTTGTGAGATTGGCACTGTTGTCTGATGGTGCTGATACAGCAAATTTAAATTCATCAATCACTAGAAAACTATCACCTCCTAATTGCTACATAATGGGGGAAGAACCAAAAAGGTATGCTGTTGTGACAGGAGCAAATAAGGGCATTGGCTATGGAATATGTAAGAAATTGGCTTCAAGTGGTGTTGTGGTTGTGCTAACAGCTAGAAATGAAGAAAGAGGTTTGGAGGCTGTAGAAAGACTCAATAAAGAGTTTGGTCTCTTTGACTTTTTGGTTTTTCACCAGCTTGATGTGAATGACCCTACAAGTGTTGCAACCTTAGCTGCTTTCATTAAAAACTTGTTTGGGAAACTTGATATCTTGGTGAATAATGCAGGTGTTACTGGGGGAAAATTATTAGATGGTGATGCTCTACTTAGAAAGAGAAATGGAGCAGAATTTGATTGGAAGAAAGTAGGGTATGAAACCTATGAGTTAGCTGAAAAATGTTTGAAAACAAACTTGTATGGTGTAGAAAGAGTAACTGAAGCTCTTGTTCCCCTTCTCCAGCTATCCATTTCACCAACAATTGTCAACATTTCCTCAAGAGTAGGACTCTTGAAGAATGTATCAAATGAGTGGGCTAGAGGAGTGTTTAATGACATTGAGGACCTAACAATGGAAAAAATAGATGAGGTGCTTAAAGAGTTTGAGAAAGATTACAAAGAAGGAACACTAGAGATAAAAGGATGGCCAACTTTTGCTTCAGCTTATACAATGTCAAAAGCAGCTTTGAATGCTTACACAAGGATTATGGCAAAGAAATACCCTCATTTTCACATAAACTCTGTTTGTCCTGGCTTTGTCAAAACTGATATGAACCACAATACTGGAAACTTAAGCATTGATGAAGGTGTTCAAACTCCTCTAATGTTGGCACTTTTGCCATATAGTGCTCCTTCTGGTTGTTTCTTTCATAAGAGTCAAGTAATACCCTTTTGA 1410 0.373 MAEKCLRTNYYGVKETTESFLPLLHLSNSPKIVNVSSQAGLLKNIPNQRAKRVFDDVENLKEERIDEVLQEFIKDFKEGSLENKGWPTIMSAYIVSKAAINSYTRILAKKHPNFYINCVCPGFVKTDINRNTGMLSVDQGAASVVRLALLSDGADTANLNSSITRKLSPPNCYIMGEEPKRYAVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLNKEFGLFDFLVFHQLDVNDPTSVATLAAFIKNLFGKLDILVNNAGVTGGKLLDGDALLRKRNGAEFDWKKVGYETYELAEKCLKTNLYGVERVTEALVPLLQLSISPTIVNISSRVGLLKNVSNEWARGVFNDIEDLTMEKIDEVLKEFEKDYKEGTLEIKGWPTFASAYTMSKAALNAYTRIMAKKYPHFHINSVCPGFVKTDMNHNTGNLSIDEGVQTPLMLALLPYSAPSGCFFHKSQVIPF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01523 469 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 175 469 - -
Car03g01523 469 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 154 - -
Car03g01523 469 Pfam short chain dehydrogenase 182 344 IPR002347 -
Car03g01523 469 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 394 413 IPR002347 -
Car03g01523 469 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 331 339 IPR002347 -
Car03g01523 469 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 259 270 IPR002347 -
Car03g01523 469 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 181 452 IPR036291 -
Car03g01523 469 CDD carb_red_PTCR-like_SDR_c 181 469 IPR045313 GO:0016616
Car03g01523 469 PRINTS Glucose/ribitol dehydrogenase family signature 394 413 IPR002347 -
Car03g01523 469 PRINTS Glucose/ribitol dehydrogenase family signature 413 430 IPR002347 -
Car03g01523 469 PRINTS Glucose/ribitol dehydrogenase family signature 259 270 IPR002347 -
Car03g01523 469 PRINTS Glucose/ribitol dehydrogenase family signature 325 341 IPR002347 -
Car03g01523 469 PRINTS Glucose/ribitol dehydrogenase family signature 182 199 IPR002347 -
Car03g01523 469 Gene3D - 177 469 - -
Car03g01523 469 Gene3D - 1 163 - -
Car03g01523 469 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 175 469 - -
Car03g01523 469 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 1 154 - -
Car03g01523 469 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 155 IPR036291 -
Car03g01523 469 Pfam Enoyl-(Acyl carrier protein) reductase 385 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01523 Car-Chr3 60773168 60776623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01523 184 434 Acyl Lipid Metabolism Gene Families AT1G24360 23.715 8.74e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01523 K15095 - qsu:111996010 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01523 03 60773168 60776623 Car07g02717 07 52257641 52287313 PCT
Car07g02716 07 52201083 52203703 Car03g01523 03 60773168 60776623 PCT