Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02641 ATGGGTTTGATTTCTGGGATTTTTATGGGGATGGTATTCGGCATAGCATTGATGGCTGGATGGGCTCGTATGATTAGGTATCGAAGTTCCAAGCGAATTGCTAAGGCTGTTGACGTCAAACTCCTTGGATCCCTCAACAGAGATGATTTAAAGAAAATTTGTGGGGAAAACCTTCCTGAATGGATATCTTTTCCTGTATATGAGCAGGTGAAATGGCTAAACAAACTCCTGAGCAAACTTTGGCCATTTGTAGCAGAAGCTGCAACGATGGTGATCAAGGAAACTGTTGAACCTCTATTGGAAGAGTACAGACCTCCTGGAATTACTTCATTGAAGTTCAGCAAGCTGTCACTTGGAAATGTAGCTCCAAAAGTTGAAGGTATTCGTGTGCAGAGTCTTACCAAAGGTCAAATCATAATGGACATAGATTTCCGCTGGGGTGGCGATCCGAGTATTATTTTGGCTGTTGAAGCTGCACTTGTTGCATCGATCCCTATTCAGTTGAAGGATCTAAAAGTTTTCACCATTATCCGTGTTATATTCCAACTTGCTGAAGAGATCCCTTGCATTTCCGCTGTTGTCGTTGCTCTACTCGCTGAGCCGAAGCCGAGGATCGATTATACTCTGAAAGCTGTTGGTGGAAGTTTGACTGCTCTTCCTGGAATTTCAGATATGATTGATGATACTGTGAACACAATTGTTACTGATATGCTCCAATGGCCACATAGGATTGTTGTTCCACTTGGCGGTATACCTGTTGATACTAGTGAACTGGAGCTTAAACCCCAAGGAAGTCTTAAAGTGACTGTAGTGAAAGCGACCGATTTAAAGAATATGGAAATGATTGGAAAATCAGATCCTTATGTAGTTTTGCATATTCGACCGTTATTCAAGGTTAAAACCAAGGTTATTGATAACAACTTGAATCCTGTTTGGGATCAAACATTTGAGTTGATTGCAGAAGACAAGGAGACTCAGTCACTCACTCTTGAGGTTTTTGATGAAGACATTGGGCAAGATAAGAGATTGGGAATTGTACAATTACCCCTTATTGACCTGGAAGCACAAACTGAAAAGGAGATTCAATTGAGGCTGCTATCGTCACTCGATACACTCAAGGTGAAAGATAAGAAGGATCGAGGAACCTTGACATTAAAGGTCTTTTATCACCAATTTAACAAAGAAGAGCAATTGAGCGCACTAGAAGCAGAAAAACAGATATTAGAACAAAGGAAGAAACTAAAAGCGGAGGGAGTCATAGGAAGCACAATGGATGCACTCGACGGAGCAGTGTCTGTGGTAGGGTCAGGTGTTGGACTTGTTGGTAGCGGTGTTGGCGCTGGAGCCGGGCTCGTTGGAAGTGGTCTCGGAGCCTTTAGTAGCGGACTTACAAAGGCAGGAAGGTTTATGGGAAGGACTATAACAGGTCATAGTGGCTCAAGAAGGAGTGGTTCATCTACTCCAATCAATAATCCACAAGAAAATGGTGGTGGTGCAAAGCCTCTTTAA 1509 0.4254 MGLISGIFMGMVFGIALMAGWARMIRYRSSKRIAKAVDVKLLGSLNRDDLKKICGENLPEWISFPVYEQVKWLNKLLSKLWPFVAEAATMVIKETVEPLLEEYRPPGITSLKFSKLSLGNVAPKVEGIRVQSLTKGQIIMDIDFRWGGDPSIILAVEAALVASIPIQLKDLKVFTIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGISDMIDDTVNTIVTDMLQWPHRIVVPLGGIPVDTSELELKPQGSLKVTVVKATDLKNMEMIGKSDPYVVLHIRPLFKVKTKVIDNNLNPVWDQTFELIAEDKETQSLTLEVFDEDIGQDKRLGIVQLPLIDLEAQTEKEIQLRLLSSLDTLKVKDKKDRGTLTLKVFYHQFNKEEQLSALEAEKQILEQRKKLKAEGVIGSTMDALDGAVSVVGSGVGLVGSGVGAGAGLVGSGLGAFSSGLTKAGRFMGRTITGHSGSRRSGSSTPINNPQENGGGAKPL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02641 502 ProSiteProfiles C2 domain profile. 247 365 IPR000008 -
Car07g02641 502 Coils Coil 391 411 - -
Car07g02641 502 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Car07g02641 502 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 497 IPR045050 GO:0008289
Car07g02641 502 MobiDBLite consensus disorder prediction 476 494 - -
Car07g02641 502 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 391 IPR035892 -
Car07g02641 502 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 497 - -
Car07g02641 502 SMART C2_3c 265 362 IPR000008 -
Car07g02641 502 CDD C2 266 362 - -
Car07g02641 502 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Car07g02641 502 PRINTS C2 domain signature 281 293 IPR000008 -
Car07g02641 502 PRINTS C2 domain signature 306 319 IPR000008 -
Car07g02641 502 PRINTS C2 domain signature 328 336 IPR000008 -
Car07g02641 502 Pfam C2 domain 264 360 IPR000008 -
Car07g02641 502 MobiDBLite consensus disorder prediction 471 502 - -
Car07g02641 502 Gene3D C2 domain 259 418 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02641 Car-Chr7 50631234 50642656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02641 266 356 Lipid Metabolism Gene Families AT4G00700 37.363 5.71e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02641 - - gmx:100777838 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02641 07 50631234 50642656 Car07g02641 07 50631234 50642656 ECH
Car03g01478 03 60265164 60277469 Car07g02641 07 50631234 50642656 PCT