Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02057 ATGAAGAAAGTGAAGCTAAACCCATTATTGTTACTCTTTCCAAATAGGCCTAAACTTCTTCACATTTTCATGGCTCTTATGTTTCTCTATTTGCTCTTCACAACTTTTGAAATCAAAACTTTTGGGTCTGTTTCAGTTTCCTCATTGATAAAGAGTGATCCCCAAAACACCCATCATAGAAAAGCCTTAAAGTTTCCCTCACAAGAATCATTTGGGTTGTTGCAAGATTTGCATAAAGTTTCCACCTTTAGTTTCAATAAAGGTTTGAATGGTTCTAGTTTGGCCCATGATAAATTTTCTGAGATTCAAAGGGCTGCTAGAGAAGCTTGGGTTGAAGGGAAGAGATTCTGGAAAGAAATTCAGATTTTGGAACTTGAAACTGATAATGTGGCTGAGAATGTTTCTGATTCGTGTCAGAATTCGATATCAATATCTGGGTCTGAATTAATGAACCAGAAAGGGATCATGGTGCTTCCTTGTGGGTTAACATTGTGGGCTCATGTTACTGTTGTTGGGACACCACGTTTGGCTCATTGGGAGAATGATCCTAAGATAACTGTGGTTAAGGATGAAGAGGAAAAAGTGATGGTGTCACAGTTTATGATGGAGCTTCATGGTTTGAAGATTGTTGATAAGGAGGAACCACCTAAGATACTTCATTTTAATCCTAGGTTGAAAGGTGATTATAGTGGGAAGCCTGTGATTGAGCAGAATACTTGTTATAGGATGCAATGGGGTTCTGCTCTCAGGTATGAGGGGTGGAAGTCCATGGCTGATGAAGATTCTGTTGATGGACAGGTGAAATGTGAAAAGTGGATTCGCGACGATGATAGCCATTCAGAAGAGTCTAAGTCAACGTGGTGGTTAACTAGAATGATCGGGCGAAAACATAAGATCGCTATAGATTGGCCATACCCTTTTATTGAGGGAAGATTATTTGTTCTCACCTTAACCGCCGGCTTGGAAGGTTACCATGTTAGTGTGGATGGAAAGCATGTGACCTCTTTTTCCTATCGCACGGGCTTTTCTCTTGAGGACGCCACGGGTCTATCAATAAAAGGCGATGTGGATGTGCACTCTATATTTGCTGCTTCGTTACCAACATCACATCCAAGTTTTGCACCACAGATGCATCTTGAGTTGCTTCCTCAATGGAAAGCTCCACCTGTTCACCATCTGAACGTGGAGCTTTTCATTGGAATACTTACTGCAGGCAACCATTTTGCCGAACGAATGGCAGTAAGGAAATCTTGGATGCAACATAAGTTAATCAAATCTTTGCATGTCGTGGCTCGATTCTTTGTTGCTTTGATTCATGTCATAGCTGCAAAGTATATCATGAAGTGCGATGATGACACATTTGTAAGAGTGGATTCTATCATCAGTGAAGCAAGAAAAGTAGGAATTGGAAAAAGTTTGTATATTGGCAATATGAATTACCACCATAGGCCCCTTCGCCATGGTAAATGGGCAGTCACATATGAGGAATGGCAAGAGGAAGAGTATCCTATCTATGCTAATGGTCCAGGTTATATAATCTCATCAGACATCGCTCAGTTCATTGTATCCAACTTCGAGGAGCACAAATTAAAAGTATGTATGCGAATGATCTTTGCTAGTTACACCATTGTCTTTTCCATTCTCTACTCTCATTTCTCCCTCTCGTGCTTGCGCGCACCAGCATGGAAATGTGTTTCAACTTTGTGTTCTATTAAAACAAAAGAGTAA 1728 0.4045 MKKVKLNPLLLLFPNRPKLLHIFMALMFLYLLFTTFEIKTFGSVSVSSLIKSDPQNTHHRKALKFPSQESFGLLQDLHKVSTFSFNKGLNGSSLAHDKFSEIQRAAREAWVEGKRFWKEIQILELETDNVAENVSDSCQNSISISGSELMNQKGIMVLPCGLTLWAHVTVVGTPRLAHWENDPKITVVKDEEEKVMVSQFMMELHGLKIVDKEEPPKILHFNPRLKGDYSGKPVIEQNTCYRMQWGSALRYEGWKSMADEDSVDGQVKCEKWIRDDDSHSEESKSTWWLTRMIGRKHKIAIDWPYPFIEGRLFVLTLTAGLEGYHVSVDGKHVTSFSYRTGFSLEDATGLSIKGDVDVHSIFAASLPTSHPSFAPQMHLELLPQWKAPPVHHLNVELFIGILTAGNHFAERMAVRKSWMQHKLIKSLHVVARFFVALIHVIAAKYIMKCDDDTFVRVDSIISEARKVGIGKSLYIGNMNYHHRPLRHGKWAVTYEEWQEEEYPIYANGPGYIISSDIAQFIVSNFEEHKLKVCMRMIFASYTIVFSILYSHFSLSCLRAPAWKCVSTLCSIKTKE 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02057 575 SMART Gal_bind_lectin_2 158 363 IPR001079 GO:0030246
Car07g02057 575 Pfam Galactosyltransferase 442 527 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car07g02057 575 Pfam Galactoside-binding lectin 155 362 IPR001079 GO:0030246
Car07g02057 575 Gene3D - 186 362 - -
Car07g02057 575 SUPERFAMILY Concanavalin A-like lectins/glucanases 157 362 IPR013320 -
Car07g02057 575 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 7 437 - -
Car07g02057 575 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 438 532 - -
Car07g02057 575 Gene3D - 420 561 - -
Car07g02057 575 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 154 364 IPR001079 GO:0030246
Car07g02057 575 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 437 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car07g02057 575 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 438 532 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car07g02057 575 CDD GLECT 158 362 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02057 Car-Chr7 24945352 24948822 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02057 20 532 Glycosyltransferase AT1G74800 50.853 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02057 K20843 - cam:101508281 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00672 02 8687160 8691696 Car07g02057 07 24945352 24948822 PCT