Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00672 aTGAAGAGGGTAAAGTTTGAATTTTTCACACTACCCAATAGATTAACACTGATTCAAATTTTCATGGTGATGATGCTTCTCTACATTCTCTTCATGAGTTTTGAAATACCCTTAGCTTTTAAAGCAGGGTTTGGTTCAGAAACTGTTGCTTTTGGTTTTCTCACCGATACAATGCCACTTTTGGTAGAACAAAACCAAGAAATTCGACCCTTTGTTTCACCATTGAAGAAAGTTTCAACCTTGAGCTTCAACAAAAGCTTTGACGGTGTCTCACAACTTCATAAAGTAGCAAAACACGCTTACATTTCAGGTAAGAAGTTATGGGAAGAAGTTGAGAGTGGTAAAGTTAAGAGCTTTTCGAGTTTTAATGTCGAAAACGGTTCGGATTCTTGTCGAAATTCGGTTTCCATTTCTGGGGTTGAGTTTAGGGAGAAGATGAAAGGTGTGATGGTGTTGCCTTGTGGTTTGACACTTTGGTCTCACGTGACTGTTGTTGGGACACCACGTTGGGCACATGCTGAAAGTGATTCTAAAATTGCTGCTGTGAAAGATGGTGATGAGGCTGTTATGGTTTCACAGTTTATGATGGAGTTGCAGGGTTTGAAAGCTGTTGATAATGAAGAACCACCTAGGATTTTGCATTTTAATCCTAGGATTAAAGGTGATTGGAGTGGTAAACCTGTTATTGAACAGAATACTTGTTATAGGATGCAATGGGGTACTGCTCTTAGGTGTGAGGGTTGGAAGTCTCGTGCTGATGGGGAAACTGTTGATGGACAGGTACAATGTGAGAAATGGATTCGCGATGACGACAATCGATCAGAAGAGTGGAAGGCAACATGGTGGTTGAACAGACTGATGGGACGAAAAAAAGTCGTGCCTTTGGACTGGCCATATCCTTTTGCTGAGGGGAAATTATTTGTTCTCACCATAAGCGCTGGTTTGGAAGGTTACCATATTACTGTGGACGGGAGACACGTGACATCCTTTCCGTATCGTACAGGCTTTGCTCTTGAGGATGCTACTGGACTATCCATAAACGGAGACGTCGACGTGCAATCTATATTTGCCGCTTCCTTACCTACATCACATCCTAGCTTTGCTCCGCAGATGCATCTCGAATTGCTTCCTCAGTGGAAGGCTCCACCTATTCTTGGTGTGAATGTGGAGCTTTTCATCGGTGTCCTTTCGGCTGGCAACCATTTTGCCGAACGGATGGCAGTAAGGAAGTCCTGGATGCAACATAAGCTTATCACATCCTCACATGTTGTCGCTCGGTTTTTCGTAGCCTTGCATGGAAGGAAGGATATAAATGCAGACATAAAGAAAGAAGCCGAGTATTTCGGTGATATTATTATAGTCCCGTACATGGATCATTATGACCTTGTTGTTTTGAAGACCATAGCTATATGTGAATATGGGATTCGCACAGTTGCTGCTAAGTATATCATGAAGTGTGATGATGACACGTTTGTGAGAGTGGATTCTATCATTAGCGAAGCGAGACAAGTTCAAAGTGGTAAAAGCCTTTATATGGGAAATATGAATTACCACCACAAGCCTCTTCGTGATGGAAAATGGGCTGTAACTTATGAGGAATGGGAAGAGGAAGATTATCCTACCTATGCTAATGGTCCGGGTTACATCGTCTCATCTGACATTGCTCGGTTCATTGTATCCGAATTTGAACAGCAAAGATTGAAATTATTTAAAATGGAAGATGTGAGCATGGGAATGTGGGTAGAGCAATTCAACAGCTCAAGGAGAGCAGTAGAGTATGTACACAGCTTGAAGTTCTGCCAATTCGGGTGCATAGAAGATTACTACACCGCACATTACCAATCGCCGAGACAAATGACTTGCATGTGGGATAAATTGCAAGACCAAGGTAAACCACTTTGTTGCAACATGAGATGA 1917 0.4215 MKRVKFEFFTLPNRLTLIQIFMVMMLLYILFMSFEIPLAFKAGFGSETVAFGFLTDTMPLLVEQNQEIRPFVSPLKKVSTLSFNKSFDGVSQLHKVAKHAYISGKKLWEEVESGKVKSFSSFNVENGSDSCRNSVSISGVEFREKMKGVMVLPCGLTLWSHVTVVGTPRWAHAESDSKIAAVKDGDEAVMVSQFMMELQGLKAVDNEEPPRILHFNPRIKGDWSGKPVIEQNTCYRMQWGTALRCEGWKSRADGETVDGQVQCEKWIRDDDNRSEEWKATWWLNRLMGRKKVVPLDWPYPFAEGKLFVLTISAGLEGYHITVDGRHVTSFPYRTGFALEDATGLSINGDVDVQSIFAASLPTSHPSFAPQMHLELLPQWKAPPILGVNVELFIGVLSAGNHFAERMAVRKSWMQHKLITSSHVVARFFVALHGRKDINADIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRTVAAKYIMKCDDDTFVRVDSIISEARQVQSGKSLYMGNMNYHHKPLRDGKWAVTYEEWEEEDYPTYANGPGYIVSSDIARFIVSEFEQQRLKLFKMEDVSMGMWVEQFNSSRRAVEYVHSLKFCQFGCIEDYYTAHYQSPRQMTCMWDKLQDQGKPLCCNMR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00672 638 Pfam Galactosyltransferase 404 587 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car02g00672 638 SMART Gal_bind_lectin_2 152 357 IPR001079 GO:0030246
Car02g00672 638 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 148 358 IPR001079 GO:0030246
Car02g00672 638 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 5 638 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car02g00672 638 Pfam Galactoside-binding lectin 149 356 IPR001079 GO:0030246
Car02g00672 638 Gene3D - 140 356 - -
Car02g00672 638 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 5 638 - -
Car02g00672 638 Gene3D - 387 627 - -
Car02g00672 638 CDD GLECT 152 356 IPR001079 GO:0030246
Car02g00672 638 SUPERFAMILY Concanavalin A-like lectins/glucanases 150 356 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00672 Car-Chr2 8687160 8691696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00672 5 638 Glycosyltransferase AT1G74800 60.239 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00672 K20843 - gmx:100803219 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00672 02 8687160 8691696 Car02g00672 02 8687160 8691696 ECH
Car02g00672 02 8687160 8691696 Car07g02057 07 24945352 24948822 PCT