Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02028 ATGGCACTATCACGCATTACATCCCCATTCCGATCTACCAACCTTCTCATCCCATCCATCCTTTCCTCACTACGACATCGTTCCATCTCGAACGACACAACCCTAACTATCGAAACCTCTATCCCATTCACCGCCCACAACTGCGATGCGCCCTCACGCTCCGTCGAAACAACCACCTCTGAACTCATGTCCTTCTTCCGCGACATGGTCCTCATGCGTCGGATGGAGATCGCTGCCGATTCGCTCTACAAGGCCAAACTAATCCGCGGTTTCTGTCATCTCTACGACGGTCAGGAAGCCGTTGCCGTCGGAATGGAAGCGGCGATTAATTCTAAAGACTGTGTGATTACTGCTTACCGTGATCATTGTACCTTTTTATGCCGAGGTGGAACCCTAATTGAGGTTTTTTCTGAGCTTATGGGGAGAAAGGATGGTTGTTCGAAGGGGAAAGGGGGTTCGATGCATTTTTATAGGAAGGAAGGTGGGTTTTATGGTGGCCATGGTATTGTTGGGGCTCAGATTCCACTTGGTGTTGGATTGGCTTTTGGTCAGAAATATAGTAAAGATCCAAATGTTACTTTTTCTTTGTATGGTGATGGTGCTGCTAATCAGGGTCAGTTGTTTGAAGCGCTTAATATTGCTGCTCTTTGGGATCTTCCTGCAATTTTGGTTTGTGAGAATAACCATTATGGAATGGGGACTGCAGAGTGGAGATCTGCTAAGAGTCCTGCTTATTACAAGCGTGGGGATTATGCTCCTGGATTGAAGGTAGATGGCATGGATGTTCTTGCTGTAAAGCAAGCTTGCAAATTTGCAAAGGAACATGCTTTGAAGAATGGTCCCCTTATTCTTGAGATGGACACATACAGATACCATGGCCACTCCATGTCTGATCCTGGCAGCACATACCGCACACGTGATGAGATTAGCGGTGTTAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTGGTTTTGGCTCACGACATTGCTACTGAAAAGGAGCTTAAGGACATTGAAAAGGAAGCAAGAAAAGAAGTTGACGAAGCCATTGCCAAAGCAAAGGAAAGTCAAATGCCAGACCCATCTGATCTATATACCAATGTATATGTTAAAGGTTTAGGGGTCGAGGCATTTGGCCCTGATAGGAAAGAAGTAAAAGCTACTTTGCCATAA 1179 0.4589 MALSRITSPFRSTNLLIPSILSSLRHRSISNDTTLTIETSIPFTAHNCDAPSRSVETTTSELMSFFRDMVLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAINSKDCVITAYRDHCTFLCRGGTLIEVFSELMGRKDGCSKGKGGSMHFYRKEGGFYGGHGIVGAQIPLGVGLAFGQKYSKDPNVTFSLYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRSAKSPAYYKRGDYAPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLVLAHDIATEKELKDIEKEARKEVDEAIAKAKESQMPDPSDLYTNVYVKGLGVEAFGPDRKEVKATLP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02028 392 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 25 392 - -
Car07g02028 392 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 52 373 IPR029061 -
Car07g02028 392 Pfam Dehydrogenase E1 component 67 363 IPR001017 GO:0016624
Car07g02028 392 Gene3D - 20 384 - -
Car07g02028 392 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 25 392 - -
Car07g02028 392 CDD TPP_E1_PDC_ADC_BCADC 65 355 - -
Car07g02028 392 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 60 372 IPR017597 GO:0004739|GO:0006086|GO:0043231
Car07g02028 392 MobiDBLite consensus disorder prediction 295 315 - -
Car07g02028 392 Coils Coil 334 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02028 Car-Chr7 24144666 24151411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02028 1 392 Acyl Lipid Metabolism Gene Families AT1G24180 77.722 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02028 K00161 - gmx:100813933 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02028 07 24144666 24151411 Car07g02028 07 24144666 24151411 ECH
Car02g00649 02 8305147 8310571 Car07g02028 07 24144666 24151411 PCT