Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00649 ATGGCTCTATCACGTTTATGTTCATCTTCTTCAAACATCGGATCCAATTTCTTCAAACCCTTCTCCTCTGCCTTCTTCACTCTCAACCGTCCGATCACCTCCGACACAACCACCACTCTCACAATCGAAACCTCCATCCCTTTTACCGCCCACAACACCGATCCTCCCTCACGCTCCGTCACCACATCTCCCTCTGAACTTCTCTCATTCTTCCGCACCATGGCCTTAATGCGCCGCATGGAAATCGCTGCTGATTCACTCTACAAAGCCAAACTCATCCGCGGTTTCTGCCACCTCTACGACGGTCAAGAAGCCGTCGCCGTCGGTATGGAAGCCGGAACAACTAAAAAGGACTGTATAATCACTGCTTACCGTGATCACTGTACTTTCCTCGGTCGTGGCGGAACCCTAGTTGAGATTTATTCTGAACTTATGGGACGGCGTGATGGGTGTTCTAAAGGGAAAGGTGGTTCAATGCATTTTTATAAGAAGGATTCTGGGTTTTATGGTGGACATGGAATTGTTGGTGCTCAAGTTCCTCTTGGTTGTGGTTTGGCTTTTGGTCAGAAATATTTGAAAGATGAGAGTGTTACTTTTGCTTTGTATGGTGATGGTGCTGCTAATCAAGGGCAGCTTTTTGAGGCTCTTAATATTGCTGCTCTTTGGGATCTTCCTGCTATTTTGGTTTGTGAGAATAATCATTATGGAATGGGAACTGCTGAGTGGAGAGCTGCTAAGAGTCCTGCTTATTACAAGAGAGGGGATTATGTTCCTGGATTGAAGGTAGATGGCATGGATGTTCTTGCTGTGAAACAAGCTTGTATATTTGCAAAGGAGCATGCTTTGAAGAATGGGCCCCTTATTCTCGAAATGGACACTTACAGATACCATGGTCACTCCATGTCTGATCCTGGCAGCACATACCGAACACGTGATGAAATTTCTGGTGTGAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTGTTATTGTCTCATGACATTGCTACTGAAAAGGAGCTAAAGGACACTGAAAAAGAAGTAAGAAAAGAAGTTGATGAAGCCATTGCTAAAGCAAAGGAGAGTCCAGTGCCAGACCCGTCTGATCTATTTACCAATGTATATGTTAAAGGATACGGGGTTGAGGCATATGGTGCTGATAGGAAAGAAGTGAGAGTTACTTTGCCATAA 1194 0.4497 MALSRLCSSSSNIGSNFFKPFSSAFFTLNRPITSDTTTTLTIETSIPFTAHNTDPPSRSVTTSPSELLSFFRTMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAGTTKKDCIITAYRDHCTFLGRGGTLVEIYSELMGRRDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAFGQKYLKDESVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACIFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIATEKELKDTEKEVRKEVDEAIAKAKESPVPDPSDLFTNVYVKGYGVEAYGADRKEVRVTLP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00649 397 CDD TPP_E1_PDC_ADC_BCADC 70 360 - -
Car02g00649 397 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 15 397 - -
Car02g00649 397 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 57 378 IPR029061 -
Car02g00649 397 Pfam Dehydrogenase E1 component 73 368 IPR001017 GO:0016624
Car02g00649 397 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 15 397 - -
Car02g00649 397 Coils Coil 339 359 - -
Car02g00649 397 Gene3D - 27 392 - -
Car02g00649 397 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 65 377 IPR017597 GO:0004739|GO:0006086|GO:0043231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00649 Car-Chr2 8305147 8310571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00649 1 397 Acyl Lipid Metabolism Gene Families AT1G24180 79.093 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00649 K00161 - gmx:100816737 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00649 02 8305147 8310571 Car02g00649 02 8305147 8310571 ECH
Car02g00649 02 8305147 8310571 Car07g02028 07 24144666 24151411 PCT