Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01984 aTGAATCCTTTCTCTTCAGGCACGCGTCTCAGGGACATGATTCGGGCAATACGTGCTTGCAAAACTGCGGCAGAGGAGCGTGCTGTTGTAAGAAAAGAATGTGCTGCCATTCGTGCTGCAATTGATGGAAATGATCAAGATTATAGGCAACGGAATATGTCTAAGCTGATGTTCATCCACATGCTTGGCTACCCCACACATTTTGGTCAAATGGAATGTCTCAAGTTGATATCGTCTCCAGGATTCCCAGAGAAGAGAATAGGTTACCTTGGACTTATGTTGCTTGTTGACGAAAGACAAGAAGTTCTAATGTTGGTCACCAATTCTTTGAAACAAGATCTTAATCACACAAATCAGTATATAGTGGGACTTGCTCTTTGTGCTTTAGGGAACATTTGTTCGGCAGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAGGTTGCTGCAGTTTCGGGATCCAAATATTCGGAAAAAGCATTTAATTATTTGTGCTTCAGGTTCCTCTGATAAGCTCTGGTACATTGATCAGATGCTAAAGATTCTGTCGAAGGCTGGTAATTTCCTAAAAGATGAAGTATGGCATGCGTTAATTGTTGTCATAAGTAACGCTTCAAAGCTTCACGGATACACCGTAAGAGCATTATACAAGATATTTCAGACATCAACAGAACAGGAAACTTTTGTTCATGTTGCAATGTGGTGCATTGGAGAGTATGGTGACTTATTAATCGATAATGTTGAAATGCTTGACATAGAAGATCCGATAACTGTGACTGAGTCAGATGCTGTGGATGTCGTAGAGCTTGCTTTGAAACGCCATGCATCAGATCTTACCGCAAAAGAAATGGCTTTGGTTGCCTTGTTGAAGCTCTCTTCACGGTTTCCTTCTTGTTCAGAGAGAATCAGGGAAGTAATCATTCAGTACCGAGGGAACCTAGTGTTAGAATTGCAGCAAAGATCTATAGAGTTCAATTCGATTATTGCAAAGCATCAAAATATTAGTTCTTCACTTGTAGAAAGGATGCCAGTTTTGGATGAGGCAACTTTCATTGCTAGGAGGAGGGCTGGGTCTTTGCAAGATGCAGCTTCAATTCCAACTGGACCTTCAGTTAGTCTTCCGAATGGAATAGCCAAAGCTGTGGCTCCTCTTGTAGATCTGCTTGATCTAAGTGCAGATGATACTCCTGCACCAAGCTCTTCTGGTGGTGGTCTTTTTCAGGATCTTCTTGGTGGTGATTCGACATTGGTGTCACAACAGTCAGGTGCTACTCATACTTCAAAAAATGGCAGAGATGTTCTTTTGGATCTTTTGTCGATTGGATCACCTTCCTCACCTATTGAATCACCTCCTGCACAAAGCAACTCATCTACAATTGATATATATTATCACCCAGTACAAGTAAAAGGGAACCACTTTCATCATTAG 1428 0.4167 MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRAAIDGNDQDYRQRNMSKLMFIHMLGYPTHFGQMECLKLISSPGFPEKRIGYLGLMLLVDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKHLIICASGSSDKLWYIDQMLKILSKAGNFLKDEVWHALIVVISNASKLHGYTVRALYKIFQTSTEQETFVHVAMWCIGEYGDLLIDNVEMLDIEDPITVTESDAVDVVELALKRHASDLTAKEMALVALLKLSSRFPSCSERIREVIIQYRGNLVLELQQRSIEFNSIIAKHQNISSSLVERMPVLDEATFIARRRAGSLQDAASIPTGPSVSLPNGIAKAVAPLVDLLDLSADDTPAPSSSGGGLFQDLLGGDSTLVSQQSGATHTSKNGRDVLLDLLSIGSPSSPIESPPAQSNSSTIDIYYHPVQVKGNHFHH 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01984 475 SUPERFAMILY ARM repeat 25 164 IPR016024 -
Car07g01984 475 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 167 462 - -
Car07g01984 475 Gene3D - 2 162 IPR011989 -
Car07g01984 475 Gene3D - 163 346 IPR011989 -
Car07g01984 475 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 5 161 - -
Car07g01984 475 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 5 161 - -
Car07g01984 475 Pfam Adaptin N terminal region 27 162 IPR002553 GO:0006886|GO:0016192|GO:0030117
Car07g01984 475 Pfam Adaptin N terminal region 163 330 IPR002553 GO:0006886|GO:0016192|GO:0030117
Car07g01984 475 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 167 462 - -
Car07g01984 475 SUPERFAMILY ARM repeat 164 335 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01984 Car-Chr7 23224220 23232615 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01984 K12391 - gmx:100817075 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00602 02 7191948 7210715 Car07g01984 07 23224220 23232615 PCT