Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00602 ATGACACATCTCGGAAATTCAGAGTCAGAAACGTTAAAATTAAAAATATTGAAAAAAAAGTTGCGAAGTGGAAGAAAGAAAGAAAGGTGCGGTGGTGTTGAGTTGTTCCCCCGAAATTCACAGAACTCACAGAAGAGACGCACAACACTCCCTTTCGTATCAGATCCGAATCTCTCTTTCCTCTCTTCTTCGTCTCTCCGATTCCGATCTCCGATTCCGGCGACTCAACTCACCGATTCCTTCCCTTCTCAATTGGATCCGGTTAAGCGTACACAACCGTCAATCATGAATCCTTTTTCTTCAGGGACGCGTTTGAGGGACATGATTCGGGCCATACGTGCTAGCAAGACTGCAGCAGAAGAGCGTGCTGTTGTAAGAAAAGAATGTGCAGCCATTCGTGCTTCAATAAATGAAAATGATCAAGATTACAGGCATCGAAATATGGCTAAGCTAATGTTCATTCACATGCTTGGGTACCCAACACATTTTGGTCAAATGGAGTGCCTCAAGTTGATTGCATCTCCCGGATTTCCAGAGAAAAGAATAGGTTATCTTGGCCTCATGTTGCTTCTTGATGAAAGACAAGAAGTTCTAATGTTGGTCACCAATTCTTTGAAACAAGATCTTAATCACACAAATCAGTATATAGTGGGACTTGCACTTTGTGCTTTAGGAAACATTTGTTCAGCAGAAATGGCTCGGGATCTTGCACCAGAGGTTGAGAGATTGCTACAATTTCGTGATCCCAATATTCGGAAGAAGGCAGCATTATGCTCTATAAGGATCATAAAGAAAGTTCCAGACTTGGCTGAAAATTTTATCAATCCTGCTACTTCCTTACTTAGGGAGAAACACCATGGAGTTTTGATCACTGGAGTTCAACTTTGTACAGATCTGTGTAAAACTAGCACCGAAGCTCTTGAACATATTAGGAAGAAATCCACAGATGGTCTGGTCAGAACTCTCAGAGATCTAGCAAACAGTCCTTATTCACCAGAGTATGATATTGCAGGCATCACAGACCCATTTCTCCACATTAGGTTGCTTAAACTTTTGCGAGTGTTAGGTGAAGGTGATGCTGATGCTAGTGACTCTATGAATGACATACTTGCCCAGGTGGCTACAAAAACTGAGTCAAATAAAGTTGCTGGGAATGCCATTTTATATGAGTGTGTTCAAACAATAATGAGCATTGAAGATAATGGTGGATTACGTGTGCTTGCCATCAATATCCTGGGGAGATTCTTGTCAAACCGTGACAACAATATCAGATACGTGGCACTAAACATGCTAATGAAGGCTGTAACTGCTGATGCTCAGGCAGTGCAGAGGCACCGGGCAACAATTCTAGAATGTGTTAAGGATTTAGATGCTTCAATTCGAAAAAGGGCCCTTGAACTTGTATATGTGCTGGTGAATGAAACTAATGTGAAGCAATTAGTGAAAGAGCTTGTAGATTATCTAGAAGTCAGTGATCTTGATTTCAGAGGGGACCTTACCACCAAAATTTGCTCCATAGTTGCAAAGTTTTCCCCAGAGAAGATTTGGTACATTGATCAGATGCTAAAGGTTCTATCTGAGGCTGGAAATTTTGTAAAAGATGAAGAGTGGTATGCCTTAATTGTTGTGATAAGCAACGCTTCTGAGCTTCATGGATATACAGTAAGAGCATTATACAGGGCATTTCAAACGTCTGCCGAACAGGAAACTCTAGTTCGAGTTACAGTGTGGTGCATTGGGGAGTATGGTGACATGTTAGTCAATAATGTTGGAATGCTTGACATAGAAGATCCAATAACAGTAACTGAGTCGGATGCAGTGGATGTTGTAGAGATTGCTATAAAACGCCATGCTTCAGATCTTACCACAAAATCAATGGCTTTGGTTGCCTTATTAAAGCTCTCTTCACGTTTCCCTTCTTGTTCAGAGAGGGTCGGGGAAATTATTGTACAGTTCAAAGGGAACCTTGTGCTAGAATTGCAGCAGAGAGCTATTGAATTCAATTCGATTATTGCTAAGCACCAAAATATTAGACCTACTCTTGTAGAAAGGATGCCGGTTTTGGATGAGGCCACTTTCATAGGTAGGAGGGCCGGGTCTTTGCCAGGTGCCGCTTCTACAGCTACTGCACCTTCAGTTAGTCTCCCAAATGGGGTAGCCAAACCTGCTGCTCCTCTTGTAGATCTACTTGATCTAAGCTCAGATGATACTCCAGCACCTAGCTCTTCTGGCGGCGATTTTCTTCAAGACCTTCTTGGTGTTGATCTGTCACCTGCATCACAGCAATCTGGTACTGGCCAAGCATCAAAAAGTGGCACAGATGTTCTTTTGGATCTTTTGTCTATTGGATCACCTTCTGTCCCGAGCAGCTCTTCTACAGTAGACATCTTATCCTCAAATACTAGTAACAAAACACCCATTTCACCATTGGATGATCTCTCACCACTTTCGCTTTCTTCAAGAGCTACTTCAAATGCTGGTCCAATGATGGATTTACTGGGTGGTATTTCCCCTAGCCCGCTAACAGAAAACAATGGACCAGTTTATCCATCTATAACTGCTTTTGAGAGCAGCTCCTTGAGGTTGACATTCAATTTGACAAAACAACCAGGAAACCCACAAACAACAGTTATCCAGGCTACCTTTACGAATTTATCCTCTAATACATATACAGATTTTGTTTTCCAGGCAGCAGTTCCTAAGTTTCTTCAATTGCACTTAGATCCAGCTAGCAGCAATACTCTCCCTGCTGCTGGAAATGGGTCTATCACACAAAGTTTGAGAGTTACTAATAGCCAACATGGAAAGAAATCACTTGTCATGCGCATAAGGATAGCATACAAGATTAATGGAAAGGATACACTGGAGGAAGGACAAATCAGTAACTTTCCTCGTGATTTATAA 2904 0.4184 MTHLGNSESETLKLKILKKKLRSGRKKERCGGVELFPRNSQNSQKRRTTLPFVSDPNLSFLSSSSLRFRSPIPATQLTDSFPSQLDPVKRTQPSIMNPFSSGTRLRDMIRAIRASKTAAEERAVVRKECAAIRASINENDQDYRHRNMAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINPATSLLREKHHGVLITGVQLCTDLCKTSTEALEHIRKKSTDGLVRTLRDLANSPYSPEYDIAGITDPFLHIRLLKLLRVLGEGDADASDSMNDILAQVATKTESNKVAGNAILYECVQTIMSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAVTADAQAVQRHRATILECVKDLDASIRKRALELVYVLVNETNVKQLVKELVDYLEVSDLDFRGDLTTKICSIVAKFSPEKIWYIDQMLKVLSEAGNFVKDEEWYALIVVISNASELHGYTVRALYRAFQTSAEQETLVRVTVWCIGEYGDMLVNNVGMLDIEDPITVTESDAVDVVEIAIKRHASDLTTKSMALVALLKLSSRFPSCSERVGEIIVQFKGNLVLELQQRAIEFNSIIAKHQNIRPTLVERMPVLDEATFIGRRAGSLPGAASTATAPSVSLPNGVAKPAAPLVDLLDLSSDDTPAPSSSGGDFLQDLLGVDLSPASQQSGTGQASKSGTDVLLDLLSIGSPSVPSSSSTVDILSSNTSNKTPISPLDDLSPLSLSSRATSNAGPMMDLLGGISPSPLTENNGPVYPSITAFESSSLRLTFNLTKQPGNPQTTVIQATFTNLSSNTYTDFVFQAAVPKFLQLHLDPASSNTLPAAGNGSITQSLRVTNSQHGKKSLVMRIRIAYKINGKDTLEEGQISNFPRDL 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00602 967 SUPERFAMILY Clathrin adaptor appendage domain 823 966 IPR013041 -
Car02g00602 967 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 100 967 - -
Car02g00602 967 MobiDBLite consensus disorder prediction 79 100 - -
Car02g00602 967 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 847 964 IPR008153 -
Car02g00602 967 Pfam Adaptin C-terminal domain 850 964 IPR008152 GO:0006886|GO:0016192
Car02g00602 967 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 100 967 - -
Car02g00602 967 Gene3D - 91 689 IPR011989 -
Car02g00602 967 Pfam Adaptin N terminal region 122 673 IPR002553 GO:0006886|GO:0016192|GO:0030117
Car02g00602 967 SMART alpha_adaptinc2 844 964 IPR008152 GO:0006886|GO:0016192
Car02g00602 967 SUPERFAMILY ARM repeat 120 688 IPR016024 -
Car02g00602 967 MobiDBLite consensus disorder prediction 785 815 - -
Car02g00602 967 Gene3D - 836 966 - -
Car02g00602 967 MobiDBLite consensus disorder prediction 731 750 - -
Car02g00602 967 PIRSF AP1_gamma 101 967 IPR017107 GO:0005794|GO:0016192|GO:0030121
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00602 Car-Chr2 7191948 7210715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00602 K12391 - gmx:100802164 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00602 02 7191948 7210715 Car02g00602 02 7191948 7210715 ECH
Car02g00602 02 7191948 7210715 Car07g01984 07 23224220 23232615 PCT