Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01980 ATGACTTCTTCTTCTTTCACCTTCATCACACTCCATCTTTTCCTCCTTCTCACCTTATTCTCTCACCATGTTCTAGCGAAACTCGTCATTTCCGAAGACGGTTACACCATCACCACCGTACTCGACGGTCACAAGCTTCACATAAACCCTTTTTCAGTTCTCCAACGACTCACTTCTTACGATCTCATCGTCCTTGATTCTACAAACAGTACTTTCTACACCGTTCAGTTACCCGTTTCTCAAGAAAGTGTTTTCAAGAGGTTTTCTGGAAATGGGTCACCTGGGTATGATGATGGTGATGTGGGTTCTGCTCGGTTTGATAAACCTAGAAGCTTTGCTGTTGATATCAGAGGGAATGTGTATGTTGCTGATAGGGTTAACAAGGTCATAAGGAAAATCAGCACCAATGGTGTCACCACAATTGCTGGAGGGTCTTCAGAAAAGTTAAGCATCAAAGATGGACCAGCACAAAATGCATCATTTTCAAATGATTTTGAGCTAACTTTCATTCCTGGCCTTTGTGCTTTACTGGTGTCAGATCATATGCACCAATTGGTCCATCAGATTAATTTGAAGGAGGAGGATTGCACCCTTGGATCTAAATCTGGGCTTGGTGCAGTTATGGTTTGGACTCTAGGATTAGGACTATCGTGTTTACTAGGCTTAGTAATCGGCATTGTGGTCCGCCCTTATATCATCCCTCATGAACGCACCAGCCGCTGCCATTTCAACGGGACATGGAAGCATTGCCGAACCAGTCTGGGGAAGCTAGTACCGACACTCTACTCCGTCATCAAAAGCGCAGTTGCTAGCTGCAGTTGCTCCTACATTTTCACGGTCCCGACAAAACTTTGGAGTCTCAGTCTTTCTCTTATTCTTCTCATGTTTAATATCAACTTTGTTTCTCCAAGGCCACATTTGGAGTCTGTGTCTTTGCTAGATTTAGATGCTTACAATAGTGGTGAGATAACAAAGTCAAGTAAGTATTTTGACCAATTGAAGGATTTGATGAGTTTTGATGAAAACCTTTTGGATTCAACCAAGGAATCCTTAAACCAAGGAAAGGTTACTAGAGGAAGGATGGCACTTAAAGATAGTAACATTCCTCATCAAGAATCATCTGTATCTAATTTCGGATCAAGCATTTGTATTATTTTGGTGGCTTTCTTTTTTACTATATCATTCGCTGACCTCACAATTCCTGAGCAAGAGTTTTTGCATGAATGTGCTGAAAATGTTGGAGAAAAATGTGGTGACCAATGGTTTGGAAAATTGTTTAGTCCTAATAAGACAATAGTTTCAAGAGATTGTTGTTATAAGCTTTTACAAATGGGTTATTCTTGCCACGTAAAAATGACAATATATATTCTTGAAACTGAACCTGCACTGCAAAATGTAAGTCGAATTGATGTTCTTACAAAAAGTGATCACATTTTTCAAAAATGTGATCGTGTTACAGAACCTGAAGACCAGAAATTTTTGGCCAAGTGTGTAGAAGAAATAGGTGCTGAATGTGGAGAAGAAGTATATAACAAATTAATCCATGATGGAAACATAACTAAACCTTGTTGTCAAAAGCTTGTGAATATGGGACTAAAATGTCATACCAATATGGTGAAAGCTTTGCTTCGTACACCCCCCATGAGAAATGTTGATGCAATTCAATTTCTCAAGAAGAACAAGAAAATTTTTGAGGAATGTAAACATACTGAATAA 1716 0.3928 MTSSSFTFITLHLFLLLTLFSHHVLAKLVISEDGYTITTVLDGHKLHINPFSVLQRLTSYDLIVLDSTNSTFYTVQLPVSQESVFKRFSGNGSPGYDDGDVGSARFDKPRSFAVDIRGNVYVADRVNKVIRKISTNGVTTIAGGSSEKLSIKDGPAQNASFSNDFELTFIPGLCALLVSDHMHQLVHQINLKEEDCTLGSKSGLGAVMVWTLGLGLSCLLGLVIGIVVRPYIIPHERTSRCHFNGTWKHCRTSLGKLVPTLYSVIKSAVASCSCSYIFTVPTKLWSLSLSLILLMFNINFVSPRPHLESVSLLDLDAYNSGEITKSSKYFDQLKDLMSFDENLLDSTKESLNQGKVTRGRMALKDSNIPHQESSVSNFGSSICIILVAFFFTISFADLTIPEQEFLHECAENVGEKCGDQWFGKLFSPNKTIVSRDCCYKLLQMGYSCHVKMTIYILETEPALQNVSRIDVLTKSDHIFQKCDRVTEPEDQKFLAKCVEEIGAECGEEVYNKLIHDGNITKPCCQKLVNMGLKCHTNMVKALLRTPPMRNVDAIQFLKKNKKIFEECKHTE 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01980 571 PANTHER NHL DOMAIN-CONTAINING PROTEIN 7 366 - -
Car07g01980 571 SUPERFAMILY NHL repeat 29 192 - -
Car07g01980 571 PANTHER - 7 366 - -
Car07g01980 571 Gene3D - 27 189 IPR011042 -
Car07g01980 571 Pfam Prolamin-like 496 567 IPR008502 -
Car07g01980 571 Pfam Prolamin-like 408 483 IPR008502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01980 Car-Chr7 23184167 23187922 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01980 - - lang:109348474 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01980 07 23184167 23187922 Car07g01980 07 23184167 23187922 ECH
Car02g00600 02 7171482 7174864 Car07g01980 07 23184167 23187922 PCT