Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00600 ATGGGTAAGCTCCAttttgcattggcttttgctcttctgcttctacttGCTAATGTTTCAGCTGCACCACCACTAACCTCTGCAATTTCACCTGCAAAGATTGTTAATGGCTTTATCTCAAATGCTGTTCCTGCTTTCACCAAATGGGTCTTTTCGCTTAAACCAATCACCAAAAAAGCGATTTCTGGGAAATCGATGATGAGGTTTGAGAGTGGATACAATGTGGAAACTGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATGCAGTTGAGGTGTTATCTAATGGGGAGCTTCTGATTCTTGATTCAGCTAATAGTAACATTTATAGGATTTCATCTTCACTTTCTTTGTATAGCAGACCAAAACTAGTGGCAGGATCTGCTGAAGGATATTCCGGACATGTTGATGGAAAATTAAAAGAGGCTAAGATGAACCATCCAAAGGGAATTACTGTTGATGACCGAGGAAATATCTACGTTGCAGATATTATGAACATGGCAATCCGGAAAATTAGCGATTCAGGGGTCACAACAATTGCTGGAGGAAAATTGAGCCGTGGAGGAGGCCATGTTGACGGACCAAGTGCAGAGGCTAAATTCTCTAACGACTTTGATGTTGTTTATGTTGGAAGTAGTTGTTCTCTACTTGTCATTGACAGGGGAAACCAAGCCATTAGGGAGATCCAACTACGCTTCGATGACTGTGCTTATCAATATGAAAGTGGATTTCCACTCGGAATTGCAATGCTTGTTGGGGCTGGCTTCTTTGGTTATATGTTGGCATTGCTGCAGCGTAGACTAAGTACAATTGTATCATCTCAGGATGTTGAGGGACCAATAATGTCTGACATTTCACCGAGTCCATATCAAAAGCACTTGAAATCCGTTAGGCCTCCTTTGATTCCGTCAGAAGACGAACCTTATAAGCAAGAAGAAAGTCTCTTTGGGTCCATTGGGAAGCTTCTTACCAATGCAGGGGCATCAATAGTAGAAATAATGGGAGCTTTGTTTGGTTTCAGAAGAAAACCGCAAAACTATGACTTTCAAAGTCAACCCTTATACCATCAACCCGAAAAGCAAGTAAATGCTTGGCCAGTTCAAGAAAGTTTTGTGGTTCCAAATGAAGATGAGCCCCCTTCTATTGACCCAAGAACTCCAACCCCTAAGAAAACATATCCTTTCATGTCCAAAGACGCCGAAAAAATGCAACAATTGTGGCAAGGTCGAGCGTTCTATAATGGATGGGAAGGAGATCTTCAGCAGCCGCCacagcagcaacaacaacaacaaaaacTTATCTATAATGGATGGGATGGAGATCTTCAGCAGCAGCAACAACCAAAACATTATTATCGTCATCAGTATCATTCATCGGTCGCTCAGACTTACTATGAGCAAAGTCGCGAGGAAACTAATGAGATAGTATTCGGAGCAGTGCAGGAACAGGATAGGAAGGAGCCTGTGGTTATCACGCCTTTGGATTATGGTGATTCTCCCTATGATCATCAAAATATGCGGTTGCGAATAGGTCCCATTGATTATATCCACAAGTACTGA 1560 0.4058 MGKLHFALAFALLLLLANVSAAPPLTSAISPAKIVNGFISNAVPAFTKWVFSLKPITKKAISGKSMMRFESGYNVETVFDGSKLGIEPYAVEVLSNGELLILDSANSNIYRISSSLSLYSRPKLVAGSAEGYSGHVDGKLKEAKMNHPKGITVDDRGNIYVADIMNMAIRKISDSGVTTIAGGKLSRGGGHVDGPSAEAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLRFDDCAYQYESGFPLGIAMLVGAGFFGYMLALLQRRLSTIVSSQDVEGPIMSDISPSPYQKHLKSVRPPLIPSEDEPYKQEESLFGSIGKLLTNAGASIVEIMGALFGFRRKPQNYDFQSQPLYHQPEKQVNAWPVQESFVVPNEDEPPSIDPRTPTPKKTYPFMSKDAEKMQQLWQGRAFYNGWEGDLQQPPQQQQQQQKLIYNGWDGDLQQQQQPKHYYRHQYHSSVAQTYYEQSREETNEIVFGAVQEQDRKEPVVITPLDYGDSPYDHQNMRLRIGPIDYIHKY 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00600 519 PANTHER NHL REPEAT PROTEIN 10 431 - -
Car02g00600 519 PANTHER NHL REPEAT PROTEIN 426 519 - -
Car02g00600 519 Gene3D - 47 230 IPR011042 -
Car02g00600 519 SUPERFAMILY NHL repeat 75 229 - -
Car02g00600 519 PANTHER - 426 519 - -
Car02g00600 519 PANTHER - 10 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00600 Car-Chr2 7171482 7174864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00600 - - gmx:100799483 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00600 02 7171482 7174864 Car07g01980 07 23184167 23187922 PCT