Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01240 ATGGATTCTCCCCCGTCACTATTGTTGCTTCTCCTCATCACACTCTCCATTTTGCATCCTTCATCTCAATCTCAAATGCTACTATTACCCCTAACACACTCACTCTCCAAAACCCAATTCAACACCACCCACCACCTCCTCAAATCAACCACCACTCATTCTACGTCACGCTTCCACCACCATCACCAACTCTCTCTCCCACTCTCCCCAGGCACCGACTACACTCTCTCCATCAACCTCAAACCCCACTCCCATCCCATAACTCTCTTCATGGACACAGGATCCGACCTTGTCTGGTTCCCGTGTTCCCCTTTCAACTGCATACTCTGCGAATTCAAACCCAACCCTTCCCCTTCTTCTTCACCCACCAACATCTCCCAAAGTGTCGCTGTTTCATGCAACTCCAATGCATGCTCCGCAGCACATAACTCTCTCCCTTCCTCCGATCTCTGCGCAATGGCTCGTTGCTCTTTAGATTCTATTGAAACCAAAGATTGCGGTTCTTTTCACTGTCCACCGTTTTACTATGCTTACGGTGATGGAAGCTTAATCGCTCGTCTCTATCGTGATACTCTTATTCTTTCTTCGCTTGAACTGAAAAACTTTACTTTCGGTTGTGCTCACACTACTTTCTCTGAACCCACCGGCGTTGCTGGGTTTGGTCGTGGATTGCTTTCTCTTCCTGCTCAGTTAGCAACTCACGCTCCTCAACTTGGGAATCGTTTCTCTTATTGTTTAGTTTCTCATTCTTTTCGTTATGAGCGAGTTAGAAAACTGAGTCCACTCATTCTGGGTCGTTACGATGATGAAAAACAGAGGAATAATGGTGAAAAGGTTGAGTTTGTTTACACGTCTATGCTTGAGAATCCAAAGCATCCTTATCTTTATTGTGTTGGGTTGAAAGGAATTTCCATAGGAAAAAAGATGATTCACGCGCCGGAGATTTTGAGGAGGGTGAATCGAAGGGGTGATGGTGGTGTTGCTGTGGATTCCGGCACGACTTTCACGATGTTGCCGGCGAGATTTTATGGTGCGGTAATGGCGGAGTTTGACCGTCGTGTTGGGAGAGTTCACCGGCGAGCTCGTGGAGTTGAGGAGAAAACGGGATTGGCGCCGTGTTATAATTTGGATGCGGCTGCGGAAGTGCCGGCGATGAGGCTACGTTTTGTTGGGGGGAATTCGAGTGTGGTGCTACCTAGGAAGAATTATTTTTATGAGTTTTTGGACGGTGAAGATGGAGTGAGGAGGAAAAGAAGAGTTGGATGTTTGATGTTGATGAACGGTGGAGATGAGGAGGAACTGAGAGGTGGGCCCGGGGCGATCCTTGGGAATTATCAGCAGCAGGGATTTGAAGTTGAGTATGATTTGGAAAAGAAGCGCGTGGGATTTGCAAGGAGAAAGTGCGCGTCGCTTTGGGACCAGCTCAACCGCGACAAAAACTAA 1443 0.4768 MDSPPSLLLLLLITLSILHPSSQSQMLLLPLTHSLSKTQFNTTHHLLKSTTTHSTSRFHHHHQLSLPLSPGTDYTLSINLKPHSHPITLFMDTGSDLVWFPCSPFNCILCEFKPNPSPSSSPTNISQSVAVSCNSNACSAAHNSLPSSDLCAMARCSLDSIETKDCGSFHCPPFYYAYGDGSLIARLYRDTLILSSLELKNFTFGCAHTTFSEPTGVAGFGRGLLSLPAQLATHAPQLGNRFSYCLVSHSFRYERVRKLSPLILGRYDDEKQRNNGEKVEFVYTSMLENPKHPYLYCVGLKGISIGKKMIHAPEILRRVNRRGDGGVAVDSGTTFTMLPARFYGAVMAEFDRRVGRVHRRARGVEEKTGLAPCYNLDAAAEVPAMRLRFVGGNSSVVLPRKNYFYEFLDGEDGVRRKRRVGCLMLMNGGDEEELRGGPGAILGNYQQQGFEVEYDLEKKRVGFARRKCASLWDQLNRDKN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01240 480 Gene3D Acid Proteases 270 473 IPR021109 -
Car07g01240 480 PANTHER BNAA01G17170D PROTEIN 1 473 - -
Car07g01240 480 ProSiteProfiles Peptidase family A1 domain profile. 74 464 IPR033121 -
Car07g01240 480 Pfam Xylanase inhibitor N-terminal 74 249 IPR032861 -
Car07g01240 480 Gene3D Acid Proteases 60 254 IPR021109 -
Car07g01240 480 PANTHER OS07G0603500 PROTEIN-RELATED 1 473 - -
Car07g01240 480 CDD pepsin_A_like_plant 165 468 IPR034161 -
Car07g01240 480 Pfam Xylanase inhibitor C-terminal 296 464 IPR032799 -
Car07g01240 480 SUPERFAMILY Acid proteases 69 473 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01240 Car-Chr7 11238782 11240698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01240 - - gmx:100805699 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01240 07 11238782 11240698 Car07g01240 07 11238782 11240698 ECH
Car08g00299 08 2356295 2358232 Car07g01240 07 11238782 11240698 PCT