Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01216 ATGGGGGAACCTGGTTGGCTACTTTACTCTATTTCAGATCCTAACGGTCCTATGTACTACAAGGGATGGTACCACTTTTTCTACCAATATAATCCAAACGGTGCCGTTTGGGGAGACATAGTTTGGGGACACGCTGTGTCAAGAGACATGATTCACTGGCTTCACCTTCCACTAGCAATGGTTGCTGATGAATGGTATGACAAGAACGGTGTTTGGACAGGGTCTGCTACCATCTTATCTGACGGTCAAATCGTCATGTTATACACCGGTTCCACTAACGAATCCGTTCAAGTTCAAAATCTTGCATACCCTGCTGATCCCTCTGACCCTCTCCTTGTAGATTGGATCAAATACCCTTCCAATCCGGTTCTCTTCCCTCCACCAGGTATCCTTTCTAAGGATTTTCGCGATCCAACAACGGCTTGGCTTACTGCTGAAGGTAAATGGCGCATAACCATAGGATCCAAGATTAACAAAACTGGTGTTGCTTTGGTTTATGACACGGTGGACTTCAAGACCTATGAGCGTAAACAGGGTTTGCTTAATGCTGTTCCTGGAACAGGTATGTGGGAGTGTGTGGACTTTTTTCCTGTTTCTAAGAAATCTGAAAATGGGTTGGATACTTCTTTTAATGGGGATGAGGTTAAACATGTGATGAAAGTGAGCTTGGATGATGATAGACATGATTATTATGCATTGGGGATTTATGATGAGAAGAAGGTTAAGTTTGTAGCAGATGATTTGAAAAATGATGTTGGTATTGGACTAAGGTATGATTATGGCATATTTTATGCTTCCAAGACATTTTATGATGAGAAAAAGCATAGGAGAGTCTTGTGGGGTTGGATTGGAGAATCTGATAGTGAATATGCTGATGTGGCCAAAGGTTGGGCTTCTGTTCAGAGCATTCCACGAATTGTGAAGCTTGACAAGAAGACTGGTAGCAATTTACTTCAATGGCCTGTTGCTGAAGTGGAAAGTTTGAGATTAAAAAGCAATGAATTTAAAAATTTGAAGGCCAAGCCAGGAACAGTGATGTCACTAGATATTGAAACTGCCACACAGTTGGACATTCTAGCTGAATTTGAGATAGACAAAGAAGCTTTGGAGAAAACGGCTCATACCAATTTAGAGTATGAGTGCAGCATCAGTGGTGGAGCTTCCCAACGTGGTGCCTTAGGACCTTTTGGTCTTTTGGTTTTGGCAGATGATGGTCTTTCTGAGTATACTCCTGTGTACTTTTATGTTGTTAAAGGAAGTAATGGAAACCTTAAGACTTCTTTCTGCTCTGATCAATCAAGGTCTTCTCAAGCAAATGATGTCCATAAGCAAATATTTGGGAGTGTAGTTCCAGTACTTAAAGGAGAAAAATTGTCCCTAAGAATATTGGTGGACCATTCAATTGTTGAAAGCTTTGCTCAAGGTGGAAGGACATGTGTGACATCAAGAGTTTATCCAACAAGGGCAATTTATGGAGCTGCTCGATTGTTCTTATTCAACAATGCTACTGAGGCCACTGTTACAGCCTCTCTTAAGATTTGGCAGATGAATTCCGCATTTATACACCCATTTCGCCCTGATCAGAAGAGCtaa 1593 0.4149 MGEPGWLLYSISDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADEWYDKNGVWTGSATILSDGQIVMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPSNPVLFPPPGILSKDFRDPTTAWLTAEGKWRITIGSKINKTGVALVYDTVDFKTYERKQGLLNAVPGTGMWECVDFFPVSKKSENGLDTSFNGDEVKHVMKVSLDDDRHDYYALGIYDEKKVKFVADDLKNDVGIGLRYDYGIFYASKTFYDEKKHRRVLWGWIGESDSEYADVAKGWASVQSIPRIVKLDKKTGSNLLQWPVAEVESLRLKSNEFKNLKAKPGTVMSLDIETATQLDILAEFEIDKEALEKTAHTNLEYECSISGGASQRGALGPFGLLVLADDGLSEYTPVYFYVVKGSNGNLKTSFCSDQSRSSQANDVHKQIFGSVVPVLKGEKLSLRILVDHSIVESFAQGGRTCVTSRVYPTRAIYGAARLFLFNNATEATVTASLKIWQMNSAFIHPFRPDQKS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01216 530 CDD GH32_Fruct1-like 11 309 - -
Car07g01216 530 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 13 524 - -
Car07g01216 530 SUPERFAMILY Concanavalin A-like lectins/glucanases 321 520 IPR013320 -
Car07g01216 530 Gene3D - 333 516 - -
Car07g01216 530 Pfam Glycosyl hydrolases family 32 C terminal 324 515 IPR013189 -
Car07g01216 530 Pfam Glycosyl hydrolases family 32 N-terminal domain 11 321 IPR013148 -
Car07g01216 530 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 13 524 - -
Car07g01216 530 SMART glyco_32 9 476 IPR001362 GO:0004553|GO:0005975
Car07g01216 530 Gene3D Glycosyl hydrolase domain; family 43 10 332 IPR023296 -
Car07g01216 530 SUPERFAMILY Arabinanase/levansucrase/invertase 11 322 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01216 Car-Chr7 10976627 10981282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01216 11 524 Glycoside Hydrolase AT1G12240 69.349 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01216 K01193 - gmx:100799487 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01216 07 10976627 10981282 Car07g01216 07 10976627 10981282 ECH
Car08g00288 08 2262720 2266073 Car07g01216 07 10976627 10981282 PCT