Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01202 ATGGAGTGGTCAGCATGTACGGACGAGTACGAGAAGCTTGTTTTTCGCATGAGCACTCCCAGAGTCGTCATTGACAATGCCGTTTGCTCCACTGCGACCGTAGTCAAGTTTGACAGTGCCAGAAAGCATGGGATTCTTTTGGAAGCAGTACAAATTCTCAGCGATCTAAACCTTTACATTAAGAAAGCATACGTTTCATCAGATGGCAGATGGTTCATGGATGTTTTTCATGTTACGGATCAAGATGGAAACAAGTTAACAGATGAGAGTGTTTTAAAATATATCGAACAGTCACTTGGTAGCATTCACAATGGGAAAACCAATCACAGAAATGGTCTTACTGCTTTGGAATTAACGGGCACGGACCGAGTTGGTCTTCTTTCTGAGGTGTTTGCTGTATTGGCTGAGTTGCAATGTGATGTTGTAGAGGCTAAAGTTTGGACTCACAATGGCCGGATTGCCTCCTTAATTTATGTTAGAGACTGCAACTTTGGTACCCCTATTGAGCATTCTCAGAAAATTAACAAGCTTGAAGCTCGCTTAAGATATGTTTTACAAGGAGATAGTGATATTAGGAGTGCAAAAACATCAATCTCTGATGCTGTTGTACACCCCGAAAGAAGACTCCACCAAATGATGTTTGCAGACCGTGATTATCAGAATAATCCAATCTTTAAGTTCACTTCTGAAATCCCATTAGTGACGGTACAAAATTGGGTGGAAAGGGGTTATTCGATTGTTAATATTCAGTGCAAGGATCGAATTAAGTTAATGTTTGATGTTGTGTGTAATTTGACTGACATGGAATATGTTGTGTTCCATGCAACTATCAACACAAGGAATGACCAAGCATACCTGGAGTTTTATATAAGGCATAAGGATGGCACCCCAATTAGTTCAGAACCAGAACGTCAACGTGTGATTCAATGCTTGCAAGCTGCAGTGGAGAGAAGATCCTGTGAGGGTATTAGGCTAGAGTTATGTACTGAAGACAGGCAAGGTCTTCTAGCAGAGGTGATGAGAACATTCAGAGAAAATGGGTTGAATGTGACTCGATCCGACATAACTACAACAGGGGACTTGGCTGCAAATGTTTTCTATGTAACAGATGCCATTGGATACCCAGCAGACCAAAAATTAATTGAATCTGTTAGGCAGAAAATTGGGTTAAGCTGTTTAAAGGTGAAGGAGTTGCCTTTTGTATGTAATGAGAAGGCAGAGAGTGAAGATCAATCTGTTGGAGTTGGTGGGGCAGTGTTATTGTCTCTTGGTAGCCTCGTGAGAAGGAATCTATATAATTTAGGTTTAATCAAGTCTTGTTCTTGA 1326 0.4087 MEWSACTDEYEKLVFRMSTPRVVIDNAVCSTATVVKFDSARKHGILLEAVQILSDLNLYIKKAYVSSDGRWFMDVFHVTDQDGNKLTDESVLKYIEQSLGSIHNGKTNHRNGLTALELTGTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVRDCNFGTPIEHSQKINKLEARLRYVLQGDSDIRSAKTSISDAVVHPERRLHQMMFADRDYQNNPIFKFTSEIPLVTVQNWVERGYSIVNIQCKDRIKLMFDVVCNLTDMEYVVFHATINTRNDQAYLEFYIRHKDGTPISSEPERQRVIQCLQAAVERRSCEGIRLELCTEDRQGLLAEVMRTFRENGLNVTRSDITTTGDLAANVFYVTDAIGYPADQKLIESVRQKIGLSCLKVKELPFVCNEKAESEDQSVGVGGAVLLSLGSLVRRNLYNLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01202 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Car07g01202 441 SUPERFAMILY ACT-like 111 184 IPR045865 -
Car07g01202 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Car07g01202 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Car07g01202 441 SUPERFAMILY ACT-like 322 389 IPR045865 -
Car07g01202 441 CDD ACT_ACR_3 244 318 - -
Car07g01202 441 CDD ACT_ACR_4 322 393 - -
Car07g01202 441 SUPERFAMILY ACT-like 29 97 IPR045865 -
Car07g01202 441 Gene3D - 113 186 - -
Car07g01202 441 Pfam ACT domain 118 157 - -
Car07g01202 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Car07g01202 441 Gene3D - 322 394 - -
Car07g01202 441 CDD ACT_ACR_1 32 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01202 Car-Chr7 10805589 10809049 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01202 - - gmx:100794729 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00596 03 29126284 29131338 Car07g01202 07 10805589 10809049 ECH
Car07g01202 07 10805589 10809049 Car07g01202 07 10805589 10809049 ECH