Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00596 ATGGACGATGAATATGCTAAGCTCATAAGAAGGATGAATCCACCCAGGGTTGTTATTGACAACAATACATGTGAATACGCCACTGTTATACAGGTTGACAGTGTCAACAAACATGGGATACTCCTAGATGTAGTCCAAGTTCTTTCAGATATGAACCTTGTGATAATAAAGGCTTATATCTCCTCTGACGGGGTTTGGTTCATGGATGTGTTTAATGTGACGGATCGTAATGGAAACAAGATCAAAGATAAAGAAGTCATTGATTATATTCAGAGGAGACTTGAAAAGAATGCCGGCTTTGCAACGTCAATGCGAGAGTCTGTTGGGGTTGTACCTACTGAAGAGCACACCGTTATTGAACTTACTGGCACAGACCGACCTGGTTTACTATCTGAAATCTGTGCAGTTCTTGCAGACCTTCACTGTAATGTGGTTACCGCTGAGATCTGGACGCATAATACTAGGGCTGCAGCCGTAGTTCATGTAACAGATGATTCCAGTGGGTGTGCCATCGAGGATCCATCTCGACTTTCCACAATAAGGGATTTGCTTTGCAACGTCCTTAGGGGGAGTGATGATCCAAAGACGGCAAAAACAGTACTTTCACATCCTGGAGTTACGTATAGGGATAGGCGATTACATCAGATTATGTTTGCTGACAGGGACTATGAAAGAGTTGAAAGGGCAGGAATGAATGAGAGAAATAAAAGTCCATTCCCACATGTAACTGTCTTAGACTGTGTTGAGAGGGATTACACTGTGGTTATCATGAGAGCAAAAGATCGACCGAAACTTTTGTTCGATATTGTTTGCACTTTAACTGACATGCAGTATGTAGTTTTTCATGGTGTGGTTCAGACAGAAAGGACAGAGGCTTATCAGGAGTTTTATATTCGACACATTGATGGCTTTCCCATAAGCTCAGAGGGTGAGAGAGAACGACTTATACAGTGTCTTGAAGCGGCAATTGAGAGGCGGGCATCTGAGGGGATGGAGCTGGAGTTGTGTACCGAAGATCGTGTAGGACTCCTCTCAGATATCACAAGGATTTTCCGTGAAAACAGTTTATGTATCAAAAGAGCTGAAATATCAACAGAAAATGGGAAGGCAAAAGATACTTTTTACGTCACTGATGTAACTGGTAGCCCTGTCGATCCAAAGATTATTGATTCGATCCGCCGTCAGATTGGCGACACGGTGCTGCAGGTGAAACATAACTCTAGTCTTTCACCAAAGCCTCCTCAAGGGACAAAAATTGGGTTTCTTTTAGGAAGTTTCTTCAAAGCTCGATCTTTTCAGAATTTTAAGTTGATTAGATCCTATTCATAA 1329 0.4221 MDDEYAKLIRRMNPPRVVIDNNTCEYATVIQVDSVNKHGILLDVVQVLSDMNLVIIKAYISSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQRRLEKNAGFATSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLADLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIRDLLCNVLRGSDDPKTAKTVLSHPGVTYRDRRLHQIMFADRDYERVERAGMNERNKSPFPHVTVLDCVERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTEAYQEFYIRHIDGFPISSEGERERLIQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGSPVDPKIIDSIRRQIGDTVLQVKHNSSLSPKPPQGTKIGFLLGSFFKARSFQNFKLIRSYS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00596 442 Gene3D - 112 188 - -
Car03g00596 442 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR6 1 434 - -
Car03g00596 442 Gene3D - 331 406 - -
Car03g00596 442 SUPERFAMILY ACT-like 328 398 IPR045865 -
Car03g00596 442 CDD ACT_ACR_2 117 190 - -
Car03g00596 442 SUPERFAMILY ACT-like 26 97 IPR045865 -
Car03g00596 442 CDD ACT_ACR_3 252 326 - -
Car03g00596 442 SUPERFAMILY ACT-like 112 187 IPR045865 -
Car03g00596 442 ProSiteProfiles ACT domain profile. 29 108 IPR002912 -
Car03g00596 442 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 434 IPR040217 -
Car03g00596 442 ProSiteProfiles ACT domain profile. 118 205 IPR002912 -
Car03g00596 442 Pfam ACT domain 117 166 IPR002912 -
Car03g00596 442 Pfam ACT domain 28 78 IPR002912 -
Car03g00596 442 ProSiteProfiles ACT domain profile. 332 411 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00596 Car-Chr3 29126284 29131338 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00596 - - gmx:100818506 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00596 03 29126284 29131338 Car07g01202 07 10805589 10809049 ECH
Car03g00596 03 29126284 29131338 Car03g00596 03 29126284 29131338 ECH