Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01149 ATGACGACGAAGCATAACGATCCCAAAATTGTTCACAATCCACCAACGACGATGAACAGTAATAATAATCCACCGAAGAATGCAACGACGCCGTCGATTCCCGCTAACCCACCACCAATTCATCTTCTCACTCAGTCTCAGCCCCAATCGCATGCTTCTTCTTCTCCTTTCCCCGGTCACTTTCAGTTATCACAACCTCAAACCCATGTCATTGCACAACAACCATCACATTTTTCAAACCCTCGTGCTCACCCTCAaacacaacaacaacaacatcaacaTGTTAACCAAGTGCATAATAACACCAACactaatgtggcttctcctgcaactacaactacaacaactactactactacCAAGCGTTCGAACCAGAAGCCGAGTTCTCGACCGCAAGGTTCGCCAAGTGGTAACCAAACATCTGCCTTTAAGACAATGGAATTGACTCCTGCTCCTTTAAGGAAAAAGAGGAGTTTACCTGACAAGTTAATACCGGAAAAGGTGGCTAAGCTTGTGCCTGAGTCGGCTCTTTATACTCGGTTACTTGAACTCGAGGCTCAGATAGATACTGCTTTGAATAGGAAAAAGATTGATGTGCAGGAGGCTGTTAAGAACCCTCCTTCTGTTAGGAAAACGCTTCGTGTTTATGTGTATAATACGTTCTCGAATCAGACAAAATTGGAGCCTGGGAGGACTGGTGATGTTGAGGAGCCTTCTTGGTCACTCAGGATAACAGGGAAGATATTGGAAGAAGACGGTAAGGATCCTGTTATGGCAGGGATTTCGAAAAAGGAAAGTCCTTTATACCCAAAGTTTTCGGCTTTCTTTAAGAAAATTACAGTGTACTTGGATCAGGGCTTTTATCCGGATAATCATGTTATTGTATGGGACAGTGCTCGTTCGTCTGTACTACAGGATGGTTTTGAGGTGAAGAGGAAAGGAGACAAAGAATTCACTGCGGTTATTAGGTTAGGAGTGAATTACTCGCCTGAAAAGTTTATGGTTTCGACGCCGTTGGCTAAAATTTTAGGAGTTGAGTTTGATACCCGTCCTAGGATAATGGCTGCTCTCTGGAACTATGTGAAGTATAGGAAGCTACAGAGCCCGAATGATCCTTCATTCTTCATGTGCGATGCTTCTCTCCAAAAAGTGTTTGGGGAAGAAAAAATGAAATTCTCCATGGCTTCGCAGAAGATATCACAGCATTTGTCACAACCACAGCCTATACATGTGGAGCATAAAATCAAGCTTTCTGGAAATTGTCCTGCTGGAAGTGCTTGTTATGATGTGCAGGTTGATGTGCCTCTTCGAGTAGAGAAAGATATGTCTGCATTATTAACAAGCATGGAGAGGCACAAAGAGATTGATGGTTTTGATGAAGTGATTGGTGCTTCTGTAAAGAAGATCCACGAGCATCTTAGGAGACGGGCTTTTCTTCTTGGCTATAGTCAGTCTCCTGCAGAGTTTATTAATGCCTTGATAGCTTCTCAGAGCAAGGATCTAAAGCTTGTTGCAGGAGATGCCAGCCATAATGCTGAAAATGAACAACGCTCTGAATTCTACACTCAACCATGGGTTGAGGATGCTGTCATTCGCTATCTAAGCCGGAAAAGTGCTCGAACTGATGTGCCTTGA 1635 0.4171 MTTKHNDPKIVHNPPTTMNSNNNPPKNATTPSIPANPPPIHLLTQSQPQSHASSSPFPGHFQLSQPQTHVIAQQPSHFSNPRAHPQTQQQQHQHVNQVHNNTNTNVASPATTTTTTTTTTKRSNQKPSSRPQGSPSGNQTSAFKTMELTPAPLRKKRSLPDKLIPEKVAKLVPESALYTRLLELEAQIDTALNRKKIDVQEAVKNPPSVRKTLRVYVYNTFSNQTKLEPGRTGDVEEPSWSLRITGKILEEDGKDPVMAGISKKESPLYPKFSAFFKKITVYLDQGFYPDNHVIVWDSARSSVLQDGFEVKRKGDKEFTAVIRLGVNYSPEKFMVSTPLAKILGVEFDTRPRIMAALWNYVKYRKLQSPNDPSFFMCDASLQKVFGEEKMKFSMASQKISQHLSQPQPIHVEHKIKLSGNCPAGSACYDVQVDVPLRVEKDMSALLTSMERHKEIDGFDEVIGASVKKIHEHLRRRAFLLGYSQSPAEFINALIASQSKDLKLVAGDASHNAENEQRSEFYTQPWVEDAVIRYLSRKSARTDVP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01149 544 MobiDBLite consensus disorder prediction 1 158 - -
Car07g01149 544 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 102 543 - -
Car07g01149 544 PANTHER CHROMATIN REMODELING COMPLEX SUBUNIT 102 543 - -
Car07g01149 544 CDD SWIB_like 335 403 - -
Car07g01149 544 Pfam SWIB/MDM2 domain 332 403 IPR003121 -
Car07g01149 544 SUPERFAMILY SWIB/MDM2 domain 323 413 IPR036885 -
Car07g01149 544 ProSiteProfiles SWIB/MDM2 domain profile. 328 405 IPR003121 -
Car07g01149 544 MobiDBLite consensus disorder prediction 39 146 - -
Car07g01149 544 Gene3D SWIB/MDM2 domain 325 411 IPR036885 -
Car07g01149 544 MobiDBLite consensus disorder prediction 1 29 - -
Car07g01149 544 SMART swib_2 329 408 IPR019835 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01149 Car-Chr7 10265750 10269727 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Car07g01149 SWIB 8.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01149 K11650 - gmx:100817271 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01149 07 10265750 10269727 Car05g01630 05 61063502 61066172 ECH
Car07g01149 07 10265750 10269727 Car07g01149 07 10265750 10269727 ECH