Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01094 ATGGATCCCAACCCAGGAACCTTCCCCATCCTCTCCTACGTCATGTCTCGTCTCCAATCTTTTAAAACCAAAACTCCAACCGAAGATCCCCAATCTCAATTCGACGTCGAACAACCCCAACCGTCAGATCcttcatcttcatcttcttcttcAATCGTTGGCCAAATGCCCAATCTCACAGACCCCAAATTGTTAGCCGCAATGACCCGGGCCATCTCAGATGTTTCACAGGCCCGATCAGTCCTAAATATCATCGGCGACAGGCCCACCCACGAGGAAGTGGACAACGCCAAAGCCAAACTGGTCGATCTCGAAGCCCATTTATCTCGTCAATTGGAAGAGATCGTTATGCTTCCGAGGCCTCCCGAAATTGACGAACAACAATGGCGGATTCACCTTACCGAAAGAGAGAAGCAATGCAGGGAATCAGCTGAGAATGAGAAGCGCGTTTACAAGTCTCTGTTGCAAAGTGATGAGATGCACGATGCTTACGAGAAGCTACTCAAGGATGCAGAGACGCGGCTTGtgaagatttatgaggatgatggtgagaacgataacgatggtgatggtgatgTGGTTAACGATGGGGAATGTGAAGAACACGTTGCGAAGATATTGCAGGAGGCGCGTGAAAAAGCTCTTGACCGAGTGGATCTTACGGAACAACGGTTGAGAACGCTTCCTGAGGCATTTTGTAACATTTCTTCGTTGGTGGTTCTCAATCTCTCCACCAATCAACTTTCGGTTATTCCTGACACAATAGCTGAGTTGCAAACTCTTGAGGAGCTTAATATCTCTTCAAATCTTTTGAAGTCACTTCCAGATTCAATTGGTTTGTTGCAAAAGTTGAAAATCCTCAATGTCTCTGGAAATAAGTTGACTGCCCTTCCTGATTCCATTAGTCAGTGCAGATCATTGGTGGAGTTGGATGCAAGCTTTAATAGTCTGTCATATTTGCCAACAAATATCGGATATGAATTACAGAATTTACAGAAGCTTTTGATTAGTTTAAACAAGATACGATCCCTTCCTTCATCTGTTTGTGAGATGAAGTCGTTGCGCTATCTAGATGCTCACTTTAATGAACTACATGGGCTTCCTATTGCAATTGGGAGATTAACTAGTCTTGAAGTTCTCAACCTGAGTAGTAACTTTAGTGACCTTCAAGAAATACCAGAGACATTTGGTGATCTGAGTAGCCTCAAGGAATTGGATCTCAGCAACAATCAAATTCATGCACTTCCTGATACATTTGGTCGCCTTGATAGTTTAATCAAGATAAACTTGGATCAGAACCCTATTGAATTGCCACCTATGGAGGTTGTCAATCAAGGGGTCCAAGCCATTAAGTCTTACATGGCCAAGAGGTGGATTGATATATTGGCAGAGGAGGAGAGCAAAAACACACATGAACTTCAAGAACAAGGACAGAATGGTTGGTTAACACGAAGTACATCCTGGTTGAAAAATGTTTCGGGAAATGTAACCGAGTATATCGGAAGTACCATGTCCCCTAGAACTCCCAAAGAGAATTATCTTGATCAAGAGCTATGA 1557 0.4168 MDPNPGTFPILSYVMSRLQSFKTKTPTEDPQSQFDVEQPQPSDPSSSSSSSIVGQMPNLTDPKLLAAMTRAISDVSQARSVLNIIGDRPTHEEVDNAKAKLVDLEAHLSRQLEEIVMLPRPPEIDEQQWRIHLTEREKQCRESAENEKRVYKSLLQSDEMHDAYEKLLKDAETRLVKIYEDDGENDNDGDGDVVNDGECEEHVAKILQEAREKALDRVDLTEQRLRTLPEAFCNISSLVVLNLSTNQLSVIPDTIAELQTLEELNISSNLLKSLPDSIGLLQKLKILNVSGNKLTALPDSISQCRSLVELDASFNSLSYLPTNIGYELQNLQKLLISLNKIRSLPSSVCEMKSLRYLDAHFNELHGLPIAIGRLTSLEVLNLSSNFSDLQEIPETFGDLSSLKELDLSNNQIHALPDTFGRLDSLIKINLDQNPIELPPMEVVNQGVQAIKSYMAKRWIDILAEEESKNTHELQEQGQNGWLTRSTSWLKNVSGNVTEYIGSTMSPRTPKENYLDQEL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01094 518 ProSiteProfiles Leucine-rich repeat profile. 283 304 IPR001611 GO:0005515
Car07g01094 518 MobiDBLite consensus disorder prediction 21 57 - -
Car07g01094 518 SMART LRR_bac_2 328 347 - -
Car07g01094 518 SMART LRR_bac_2 374 395 - -
Car07g01094 518 SMART LRR_bac_2 281 300 - -
Car07g01094 518 SMART LRR_bac_2 235 254 - -
Car07g01094 518 SMART LRR_bac_2 258 277 - -
Car07g01094 518 SMART LRR_bac_2 351 370 - -
Car07g01094 518 SMART LRR_bac_2 304 323 - -
Car07g01094 518 SMART LRR_bac_2 399 418 - -
Car07g01094 518 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 3 504 - -
Car07g01094 518 Gene3D Ribonuclease Inhibitor 324 456 IPR032675 -
Car07g01094 518 Gene3D Ribonuclease Inhibitor 123 323 IPR032675 -
Car07g01094 518 Pfam Leucine rich repeat 260 317 IPR001611 GO:0005515
Car07g01094 518 Pfam Leucine rich repeat 376 435 IPR001611 GO:0005515
Car07g01094 518 Coils Coil 204 224 - -
Car07g01094 518 PANTHER LEUCINE-RICH REPEAT-CONTAINING 3 504 - -
Car07g01094 518 ProSiteProfiles Leucine-rich repeat profile. 260 281 IPR001611 GO:0005515
Car07g01094 518 SUPERFAMILY L domain-like 213 435 - -
Car07g01094 518 SMART LRR_typ_2 305 327 IPR003591 -
Car07g01094 518 SMART LRR_typ_2 399 422 IPR003591 -
Car07g01094 518 SMART LRR_typ_2 281 304 IPR003591 -
Car07g01094 518 SMART LRR_typ_2 328 351 IPR003591 -
Car07g01094 518 SMART LRR_typ_2 258 280 IPR003591 -
Car07g01094 518 SMART LRR_typ_2 374 398 IPR003591 -
Car07g01094 518 SMART LRR_typ_2 235 257 IPR003591 -
Car07g01094 518 Coils Coil 94 114 - -
Car07g01094 518 ProSiteProfiles Leucine-rich repeat profile. 237 258 IPR001611 GO:0005515
Car07g01094 518 ProSiteProfiles Leucine-rich repeat profile. 401 422 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01094 Car-Chr7 9741778 9744068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01094 287 508 Receptor kinase-like Gene Family AT3G56370 31.602 1.18e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01094 - - gmx:100782818 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01094 07 9741778 9744068 Car05g01695 05 61764757 61769362 PCT