Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01695 ATGGATCCCAACCCACGAACCTTCCCGATTCTCTCCTACGTCATGTCCCGCCTCCCATCCTTAACTTCCAAAACCCCTACTCCCACTGATATCGAATTATTCGACATCGAACAGCCACACTCTCCTCCACACTCCCAAATCGTTTCTCAAATGCCAAACCTAACCGACCCCCAACTTCTTGCCTCAATGGGCCGGGCCATCTCTGATGTATGTCAGGCCCGTTCCGTTCTTAACCTAATCGGCCACCGCCCCACTCACGAGGAAGTGGACCACGCAAAGGCCAAGCTACTTCAAATTGAAGCCCAACTCTCACGCCAGCTGGAAGGAATCGTACTGCTTGCTAGGCCCCCGGAGATCGAGATTCATGGATGGCGGGCCCACCAAGCggagaaggagaagcagtgcagggaagaggctgagaaggagaagCGCGTTTGGAAATCGCTGTTGCAGTTGGATGAGATGCATGAGGCTTACGAGAAGCTTCTCAAGGACTCTGAGAAACGATTGGTTACAATGTACGAGTCtgccggcgacggtgacggcgacggcgacgttgttggtggaggcggtgatgaggtgaATGAAGAGGTTGTGGGTATTCTGCAGGAAGCGTATGGTAAAGGAATGGAACGAATTGACCTTTCTAACCGGAAATTGAAGCTCTTGCCCGAAGCTTTTGGTCGGGTTCCTGGTTTGCTTGTGCTTGACGTTTCGGCTAATCAGCTTTTGGCAATTCCTGACTCAATAGCTCGCTTGGAAAACCTGGAGGAGCTTAATCTCTCTTCAAATCTTTTGGAATCACTGCCCGATTCAATTGGGTTACTGCAAAGGTTGAAATTGCTCAATGTTTCTGGAAACAAACTTACTGCCCTTCCTGATACCATTTGTCAGTGCAGGTCATTAGTTGAGCTGGATGCAAGCTTTAACAATCTGTCATACTTGCCAACAAACATTGGGTATGAACTACCAAACTTGAAGAAACTCATGATTCAATTGAACAAAATTCGATCTCTTCCCTCATCCATTTGTGAGTTGGAGTCGTTGTGCTATTTGGATGCTCACTTCAATGAGCTCCACGGGCTCCCAATAGCAATTGGGAGACTGACTAATCTGGAAGTTCTCAACTTGAGCAGTAATTTCACTGATCTTAAAGAACTTCCAGAGACATTTGGTGAATTGACTAATCTCAGGGAATTGGATCTCAGTAATAATCAGATCCATGCACTTCCCGATACATTTGGTTGCCTTGATAACTTGACCAAGCTCAACTTGGAACAGAATCCTATTGAATTGCCACCAGTAGAGATTGTAAATCAAGGGGTCCAAGCCATCAAGACTTTTATGGCCAAAAGGTGGATTGATATGCTGGTAGAAGAAGAAAGAAAAAGCAATCAAGAAATGCATGAACAAGTTGAGGGTGGCTGGTTAACACGAAGCACCTCCTGGTTGAAGAATGTTTCTGGAAATGTAGTTGGGTATCTTGGAACTGCCGTTGGATCTCCTATGTTACCCAAATCTCCCAAAGATGCTTATCTTGATCAGCAGCTATGA 1554 0.4279 MDPNPRTFPILSYVMSRLPSLTSKTPTPTDIELFDIEQPHSPPHSQIVSQMPNLTDPQLLASMGRAISDVCQARSVLNLIGHRPTHEEVDHAKAKLLQIEAQLSRQLEGIVLLARPPEIEIHGWRAHQAEKEKQCREEAEKEKRVWKSLLQLDEMHEAYEKLLKDSEKRLVTMYESAGDGDGDGDVVGGGGDEVNEEVVGILQEAYGKGMERIDLSNRKLKLLPEAFGRVPGLLVLDVSANQLLAIPDSIARLENLEELNLSSNLLESLPDSIGLLQRLKLLNVSGNKLTALPDTICQCRSLVELDASFNNLSYLPTNIGYELPNLKKLMIQLNKIRSLPSSICELESLCYLDAHFNELHGLPIAIGRLTNLEVLNLSSNFTDLKELPETFGELTNLRELDLSNNQIHALPDTFGCLDNLTKLNLEQNPIELPPVEIVNQGVQAIKTFMAKRWIDMLVEEERKSNQEMHEQVEGGWLTRSTSWLKNVSGNVVGYLGTAVGSPMLPKSPKDAYLDQQL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01695 517 SMART LRR_typ_2 394 416 IPR003591 -
Car05g01695 517 SMART LRR_typ_2 253 275 IPR003591 -
Car05g01695 517 SMART LRR_typ_2 369 393 IPR003591 -
Car05g01695 517 SMART LRR_typ_2 300 322 IPR003591 -
Car05g01695 517 SMART LRR_typ_2 417 440 IPR003591 -
Car05g01695 517 SMART LRR_typ_2 276 299 IPR003591 -
Car05g01695 517 SMART LRR_typ_2 230 252 IPR003591 -
Car05g01695 517 SMART LRR_typ_2 323 346 IPR003591 -
Car05g01695 517 Gene3D Ribonuclease Inhibitor 203 452 IPR032675 -
Car05g01695 517 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 3 499 - -
Car05g01695 517 SUPERFAMILY L domain-like 210 430 - -
Car05g01695 517 Pfam Leucine rich repeat 255 312 IPR001611 GO:0005515
Car05g01695 517 Pfam Leucine rich repeat 370 430 IPR001611 GO:0005515
Car05g01695 517 ProSiteProfiles Leucine-rich repeat profile. 255 276 IPR001611 GO:0005515
Car05g01695 517 PRINTS Leucine-rich repeat signature 256 269 - -
Car05g01695 517 PRINTS Leucine-rich repeat signature 394 407 - -
Car05g01695 517 PANTHER LEUCINE-RICH REPEAT-CONTAINING 3 499 - -
Car05g01695 517 Coils Coil 149 169 - -
Car05g01695 517 SMART LRR_bac_2 369 390 - -
Car05g01695 517 SMART LRR_bac_2 276 295 - -
Car05g01695 517 SMART LRR_bac_2 323 342 - -
Car05g01695 517 SMART LRR_bac_2 394 413 - -
Car05g01695 517 SMART LRR_bac_2 253 272 - -
Car05g01695 517 SMART LRR_bac_2 346 365 - -
Car05g01695 517 SMART LRR_bac_2 230 249 - -
Car05g01695 517 SMART LRR_bac_2 299 318 - -
Car05g01695 517 ProSiteProfiles Leucine-rich repeat profile. 396 417 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01695 Car-Chr5 61764757 61769362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01695 200 446 Receptor kinase-like Gene Family AT3G51740 30.739 3.35e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01695 - - gmx:100803823 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01695 05 61764757 61769362 Car05g01695 05 61764757 61769362 ECH
Car07g01094 07 9741778 9744068 Car05g01695 05 61764757 61769362 PCT