Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01081 ATGACAACATCAACACAAGTTTTTGGAAATGATATAAATTATTGTTCTACCTGCTATTACAAAATGATGGCGAATCTACCAACTGTGCTATCGTTGAGGCACTTGTTTGTGTTGTCGCTTGCTTTGAATGTTAGTTTGATTTTAAGAATGGTTTATGATGAACAAGGAGGAAACAATAACAAGAAATCGATGGAAGTGTATAATCATAATATCCTAAAATCACGTTTGGTTATACCTTCAACTTCTTTTGCTAATTCTACTCGTAAAGATCATTCCGGAGTCGTGGATAGAGTAATCAAGCTTGACCATGGAGATCCGACAATGTACGAAAGGTTTTGGCGACAAATGGGAGACAGGAGCACAATAGTAATTCCAGGATGGGCATCTATGAGCTATTTTTCTGATGGATCAAGCATTTGTTGGTTTCTTGAGCCTGAATTTGCGAAGGAAGTAGTGAGATTGCACAATGTGGTTGGAAATGCAGTAACACAAGGTCGCCACGTTGTTGTTGGAACAGGTTCATCTCAGTTAATTCTAGCTGCTCTTTATGCTCTGTCTTCCCCTGATGCACTGGAACCCATCACCGTTTTATCTGCCGTACCTTATTACTCGTCATATCCATCAATGGTAGATTACCAGAAATCAGGTCTTTACAAATGGGGTGGTGATGCAGAGAGTTTTGACAAAGAAGTTCCTTACATTGAGCTAGTTACTTCTCCAAATAACCCTGATGGATATTCAAGGCAAACAGTAGTTAACCGAAACCAAGGACTATTGATTCATGATCTTGCCTATTATTGGCCACAATACACTCCAATAGTATCTGCTTCAGATTATGATCTTACTCTTTTTACTCTCTCAAAAAGCACTGTTATAAGAATTTGTTATGGTTTCCATTTCCAAATTATACTTTGTAGGTGGGCTCTTGTCAAAGACCGTGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTAAATACAATTGGTGTCTCTAAGGATTCTCAACTCAGAGCTGCCAAGGTTTTAAAAACAATTTCTGACAGCTCCCAAGATGAAGAATCGTTTTTCAAGTACAGCTACAAGATCATGGAACAAAGGTGGAAGCTACTGAGAGCAGTAGTTGAAAGTGGTGATTTATTCAGTTTGCCTAAATTTACTTCAGCATTCTGCACCTTTTTCAATCAGGAGTTGGAGCCTCAACCAGCATTTGCTTGGTTGAAGTGTGAAGGGGATATAGAGGACTGCGAAAGTTTCCTTCGTGGACACAAGATTTTGACCAGGGGTGGTAGAGCATTTGGGGATAGCCCAAAATATGTAAGACTTAGCCTGCTCGATACAGATGAAAATTTTATGCTGTTATTAGATAGGCTATCTACCATACAGCACTGA 1389 0.3902 MTTSTQVFGNDINYCSTCYYKMMANLPTVLSLRHLFVLSLALNVSLILRMVYDEQGGNNNKKSMEVYNHNILKSRLVIPSTSFANSTRKDHSGVVDRVIKLDHGDPTMYERFWRQMGDRSTIVIPGWASMSYFSDGSSICWFLEPEFAKEVVRLHNVVGNAVTQGRHVVVGTGSSQLILAALYALSSPDALEPITVLSAVPYYSSYPSMVDYQKSGLYKWGGDAESFDKEVPYIELVTSPNNPDGYSRQTVVNRNQGLLIHDLAYYWPQYTPIVSASDYDLTLFTLSKSTVIRICYGFHFQIILCRWALVKDREVAKKMTKFIELNTIGVSKDSQLRAAKVLKTISDSSQDEESFFKYSYKIMEQRWKLLRAVVESGDLFSLPKFTSAFCTFFNQELEPQPAFAWLKCEGDIEDCESFLRGHKILTRGGRAFGDSPKYVRLSLLDTDENFMLLLDRLSTIQH 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01081 462 CDD AAT_like 145 457 - -
Car07g01081 462 Gene3D Aspartate Aminotransferase, domain 1 354 461 IPR015422 GO:0003824
Car07g01081 462 Gene3D - 144 353 IPR015421 GO:0003824
Car07g01081 462 Pfam Allinase 100 460 IPR006948 GO:0016846
Car07g01081 462 Gene3D - 81 139 IPR037029 GO:0016846
Car07g01081 462 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 22 461 - -
Car07g01081 462 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 22 461 - -
Car07g01081 462 SUPERFAMILY PLP-dependent transferases 89 459 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01081 Car-Chr7 9633602 9644304 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01081 K16903 - gmx:100818522 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01081 07 9633602 9644304 Car05g01707 05 61983366 61989465 PCT