Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01707 ATGGCTAAGATTTCTAGCACCGTATTCTCTTTGAGACACTTCTTAGTTTTATCACTCGCTTTAAATGTGAGCTTAATACTGAGAATAGTGTACGAAGGTGAAGAAGGCCATGACAACTCTTGTTTGAAGAATGAAACAGGAAATTCAATTTCTAGAGCTGATTTTGACACAAAAACACATAATATCCTCAAATCACGTGTGGTTATGTCATCTACTTTGTCTTCGGGGAATTCTACTTGCAAATATCATACAGGAAGCAGGAACAAAGTAATCAATCTCGACCACGGGGATCCGACAGTGTATGAAAGATTTTGGCGACAAAGGGGTGACAAGAGCACGATAATAATATCAGGATGGCAATCAATGAGTTATTTTTCGGATGTGTCGAACATATGCTGGTTTCTGGAAACAGAGTTTGCTAAGGAGGTTGTGAGGTTACACACATTGGTCGGTAATGCAGTCACTGAAGGTCGTCACATTGTTGTAGGGACAGGTTCCTCTCAACTTTTTCTTGCTGCACTCTATGCTCTCTCCCCTCAACATTCACCTCAACCAATCAATGTTGTCTGTGCCTCTCCCTATTACTCTTCATACCCATCAATGACAGATTACCTGAAATCTGGACTATACAAATGGGGAGGGAATGCAGATAGTTATGAGAAAGAAGGTCCGTACATAGAGGTGGTGACATCACCAAATAATCCAGATGGACATGTAAGAAGGTCAAAGGTCAACAGAAGTGAGGGACTACTGCTTCATGATCTTGCCTATTACTGGCCCCAATACACTCCTATATCTTCCCCTGCTGATTATGATCTCACTCTTTTTACTCTCTCCAAAACCACTGGTCATGCTGGAATGCGCATAGGGTGGGCTCTTGTGAAAGACAAAGAGGTAGCAAAGAAAATGACCAAATTCATAGAGCTGAACACAATAGGAGTCTCAAAGGATTCACAACTAAGAGCTGCTAAGGTGTTAAGGGCTGTTTCTGATAGCTGTGAAGAAGAAAACTCTCAAGAGGGAGAGTCTTTCTTCAAGTTCAGCCACAATCTCATGGCAAACAGGTGGAAGCAGCTGAGAGAAGTAGTGGACTCTAGTCAATTGTTTAGTTTGCCACAGTTTTCTCCTGCTTTTTGCAATTTTTTCAATCAAGTGGTAGAGCCTCAACCAGCTTTTGTGTGGTTGAAGTGTGAGGGAAATGTGGAAGACTGTGAAAAGTTCCTTAGAGCACACAACATCATAACAAGAAGTGGAAAGCACTTTGGGGTTAGCAGAAAATATGTAAGAATTAGCTTGTTGGATACTGATGAAAATTTTAACCAATTTGTAGACAGACTATCTACCATACAGTCTCTGTAG 1359 0.4113 MAKISSTVFSLRHFLVLSLALNVSLILRIVYEGEEGHDNSCLKNETGNSISRADFDTKTHNILKSRVVMSSTLSSGNSTCKYHTGSRNKVINLDHGDPTVYERFWRQRGDKSTIIISGWQSMSYFSDVSNICWFLETEFAKEVVRLHTLVGNAVTEGRHIVVGTGSSQLFLAALYALSPQHSPQPINVVCASPYYSSYPSMTDYLKSGLYKWGGNADSYEKEGPYIEVVTSPNNPDGHVRRSKVNRSEGLLLHDLAYYWPQYTPISSPADYDLTLFTLSKTTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCEEENSQEGESFFKFSHNLMANRWKQLREVVDSSQLFSLPQFSPAFCNFFNQVVEPQPAFVWLKCEGNVEDCEKFLRAHNIITRSGKHFGVSRKYVRISLLDTDENFNQFVDRLSTIQSL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01707 452 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 6 451 - -
Car05g01707 452 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 6 451 - -
Car05g01707 452 Gene3D - 57 131 IPR037029 GO:0016846
Car05g01707 452 CDD AAT_like 138 446 - -
Car05g01707 452 Gene3D - 135 339 IPR015421 GO:0003824
Car05g01707 452 Gene3D Aspartate Aminotransferase, domain 1 342 450 IPR015422 GO:0003824
Car05g01707 452 SUPERFAMILY PLP-dependent transferases 73 448 IPR015424 -
Car05g01707 452 Pfam Allinase 91 449 IPR006948 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01707 Car-Chr5 61983366 61989465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01707 K16903 - gmx:100807013 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01707 05 61983366 61989465 Car05g01707 05 61983366 61989465 ECH
Car07g01081 07 9633602 9644304 Car05g01707 05 61983366 61989465 PCT