Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01052 ATGCCAGGTATTGTTACAATTGAAGCAAATGAAATGAATGAGTTTGAGAACCCTTCCACCTCCTCTAAGGACATTTTAAATCAAATTATTTCACCAAGGAAATCCATGATTCCACAAATACTTGCACCAAATTCTGAATATGCACGTGATAAACGACCTTCTCGTCAATCGCCCTCATCCCGAAGCTTTGGATCTGAGAGTGATGGATCAATAATTTATTCAGAATTCAGGAAGGTGgagacagtgaaagatgaaatggagaaagagacagaAGGGGATTCTAGCCGTGAAGCATCTTCTCACCTTGCAACTTCAAGATCTCTTTCTTCAAAATCAAGAACTATGGGAAAAACTCCTTCTACAAAACCTCCTATTGAAAAGAAGAATGATAACAATCCTTTGAGAAAACAAAATGCAGGAGTTACTAGTAATGTCACAAAGTCAAAGAGTTCTTCGTCTATGGGAAAATCAAGGTCACAAAGTCGAGTTGAGAATTCAAATGAATCAACATTATGTAATCCTGAGCTTGGATCATTTTTACTAAAGCAAGCAAGGGATCTAATTTCATTAGGAGAAAATCCGCCGAAAGCTCTTGAATTATCCCTTCAAGCACTGAAATTGTTTGAGAAATCTGCTAACGGGAAACCGAGTTTGGACCTGGTTATGTGTTTACATGTTACTGCCGCAATATATTGCAGTTTAGGCCATTACAATGAGGCAATTCCAATTATAAAGCGCTCAATCGAGATTCCTATCATCGAAGAAGGCCAACAACATGCCATGGCGAAATTTGCCGGTCATATGCAACTTGGAGACACTTATGCTATGCTAGGCCAGCTTGAGAATTCAATTATGTGTTATAATAGAGGGTTGGATGTGCAAAGACAGGTTTTGGGAGCAACAGACTCAAGAGTTGGTGAAACTTGTAGGTATGTGGCAGAAGCTAATTTTCAAGCAATGCAATTTGATGAGGCAGAGAGGTTGTGTCAAATTGCTCTTGATATTCATAGAGCAAATGGTTCACCTTCTTCTCTTGAAGAAGCAGCTGATAGAAGGTTGATGGGGCTTATATGTGAAACTAATGGAAATCATGAAGCAGCATTGGAACACCTTGTTTTAGCAAGCATGTCAATGGTATCAAATGGTCAGGAAGTGGAAGTTGCGTCTGTTGATTGCAGTATTGGCGACACATTTTTATCGTTGGCTCGATATGATGAGGCCATCTTGGCTTATAAAAAGGCATTGGCAGTTTTCAAGACTCACAAAGGAGAGAACCATCCTGTGGTTGGATCGGTCTATGTACGTCTTGCCGAATTGTATAGTAGGACATGGAAGATAAGGGAATCAAAATCATATTGTGAGAGTGCACTGAAAATCTATGAAAATCCAATGACTGGTGTCCCTCCTGATGAGATTGCTAGTGGTTTTGTAAATGTTGCAGCTATTTACGAGTCAATGAATGAGCTTGAGCAAGCACTCAAGTTACTGCACAAGGCACTAGAGATACATAATGATGCCCCTGGACAACAGAACACAATTGCAGGAATTGAAGCTCAAATGGGGGTTATATATTATGTGTTGGGAAACCAGAATGAATCTTACAATGCTTTCAAGAATGCTGTCTCAAAGCTTCGTGCCACGGGAGAGAGAAAATCAGCTTTCTTTGGTATTGTTCTTAATCAAATGGGACTTTGTTGTGTACAACTTTGTGCCTTAAATGAGGCTGCAAATTTATTTGAAGAAGGTAAGGTTGTTCTTGAACAAGAGTATGGACCCTATCACCCTGAAACACTTGGTGTATATAGCAATCTGGCTGGCACATATGATGCACTTGGCAGGGTGGAGGATGCAATTGATATTATGGAGTACATTGTAGCTGTGAGGGAGGAAAAGCTTGGGACAGCAAACTTTGAAGTTGTTGATGAGAAGAGAAGGTTGGATGAGTTGTTGAAGGAAACGGGAAGAGTTAGGAACAGAAAAACCACGTCACTTGAGCTCCTTCTTGATGTTAATATGATAGACATTGAGGACTAA 2034 0.3928 MPGIVTIEANEMNEFENPSTSSKDILNQIISPRKSMIPQILAPNSEYARDKRPSRQSPSSRSFGSESDGSIIYSEFRKVETVKDEMEKETEGDSSREASSHLATSRSLSSKSRTMGKTPSTKPPIEKKNDNNPLRKQNAGVTSNVTKSKSSSSMGKSRSQSRVENSNESTLCNPELGSFLLKQARDLISLGENPPKALELSLQALKLFEKSANGKPSLDLVMCLHVTAAIYCSLGHYNEAIPIIKRSIEIPIIEEGQQHAMAKFAGHMQLGDTYAMLGQLENSIMCYNRGLDVQRQVLGATDSRVGETCRYVAEANFQAMQFDEAERLCQIALDIHRANGSPSSLEEAADRRLMGLICETNGNHEAALEHLVLASMSMVSNGQEVEVASVDCSIGDTFLSLARYDEAILAYKKALAVFKTHKGENHPVVGSVYVRLAELYSRTWKIRESKSYCESALKIYENPMTGVPPDEIASGFVNVAAIYESMNELEQALKLLHKALEIHNDAPGQQNTIAGIEAQMGVIYYVLGNQNESYNAFKNAVSKLRATGERKSAFFGIVLNQMGLCCVQLCALNEAANLFEEGKVVLEQEYGPYHPETLGVYSNLAGTYDALGRVEDAIDIMEYIVAVREEKLGTANFEVVDEKRRLDELLKETGRVRNRKTTSLELLLDVNMIDIED 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01052 677 PANTHER KINESIN LIGHT CHAIN 1 671 - -
Car07g01052 677 Gene3D Tetratricopeptide repeat domain 162 264 IPR011990 GO:0005515
Car07g01052 677 Gene3D Tetratricopeptide repeat domain 265 373 IPR011990 GO:0005515
Car07g01052 677 ProSiteProfiles TPR repeat profile. 388 421 IPR019734 GO:0005515
Car07g01052 677 Pfam Tetratricopeptide repeat 387 462 - -
Car07g01052 677 Pfam Tetratricopeptide repeat 557 622 - -
Car07g01052 677 MobiDBLite consensus disorder prediction 1 170 - -
Car07g01052 677 MobiDBLite consensus disorder prediction 77 96 - -
Car07g01052 677 MobiDBLite consensus disorder prediction 97 119 - -
Car07g01052 677 ProSiteProfiles TPR repeat profile. 473 506 IPR019734 GO:0005515
Car07g01052 677 SUPERFAMILY TPR-like 386 507 IPR011990 GO:0005515
Car07g01052 677 Pfam Tetratricopeptide repeat 268 295 IPR019734 GO:0005515
Car07g01052 677 SUPERFAMILY TPR-like 218 369 IPR011990 GO:0005515
Car07g01052 677 SMART tpr_5 514 547 IPR019734 GO:0005515
Car07g01052 677 SMART tpr_5 221 254 IPR019734 GO:0005515
Car07g01052 677 SMART tpr_5 556 589 IPR019734 GO:0005515
Car07g01052 677 SMART tpr_5 264 297 IPR019734 GO:0005515
Car07g01052 677 SMART tpr_5 430 463 IPR019734 GO:0005515
Car07g01052 677 SMART tpr_5 598 631 IPR019734 GO:0005515
Car07g01052 677 SMART tpr_5 388 421 IPR019734 GO:0005515
Car07g01052 677 SMART tpr_5 306 339 IPR019734 GO:0005515
Car07g01052 677 SMART tpr_5 473 506 IPR019734 GO:0005515
Car07g01052 677 MobiDBLite consensus disorder prediction 12 34 - -
Car07g01052 677 Coils Coil 486 506 - -
Car07g01052 677 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 671 - -
Car07g01052 677 MobiDBLite consensus disorder prediction 134 170 - -
Car07g01052 677 SUPERFAMILY TPR-like 514 627 IPR011990 GO:0005515
Car07g01052 677 Gene3D Tetratricopeptide repeat domain 374 555 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01052 Car-Chr7 9322529 9325498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01052 - - gmx:100813461 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01052 07 9322529 9325498 Car05g01739 05 62469078 62472979 PCT