Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01739 ATGCCAGGCATGGTTACAAATGGTGTTCATGATGACGGTGGATCGAATGAGATGAATGAGGACCATTCTCCTTCTAAGGAGAGCTTAACTCCAATTAAGTCTCTACGGAGTTCACTGAGTCCACAGAGGCACCAAAGTGTCGGTCCCAGTTTCCCGGTTGATGGGGTGGTCGAGCCTTCCATCGAGCAGCTTTATGAAAATGTGTGTGACATGCAGAGTTCTGATCAGTCTCCCTCAAGGCGAAGTTTTGGATCTGATGGTGATGAATCTAGAATCGATTCGGAATTGCACCATCTGGTTGGAGGACGAATGAGGGAGTTGGAGATAATGGAAGAGGAAGTGGAGGTGGAACAAAGGCCAGGAGAGAGTTCTAGCTGTGAAACATCTTCTGCAATGGGTAGTTTATCTGATGATAAGAAGTTGGATAAGGTGGCTGTGATTCGATCTGCTAGCAAAAGTCCCGTTTCCTCAGAAAAATCCATCAAACTGTTGGATTCACAATTGAGCTCTGACACTTCGCCAAAATTAAAAGCTAAAGGTAAAAGTCCTCCTTCAAAGCCTTCTTTGGAGAAAAAGAATGATAAGCCTTTGAGAAAACAAGTTAGAGGAGTTACCGGTGCGAAGAATCCGAGGAATTCTCCTTTGGGAAAATCAGTGTCACAGAACCGTGTTGAGAATTCGTCTGAATCAGCATTAGATAGACCAGAACAGGCACCAATACTACTAAAGCAAGCAAGAGATCTTATTTTATCAGGAGATAATCCACATAAAGCTCTTGAACTAGCTCTTCAAGCAATGAAACTGTTTGAGAAGTTTGGTAATGGAAAACAAAGTTTGGAACTGGTCATGTGTTTACATGTTACAGCAGCAATATATTGCAGCTTGGGTCAATACAGCGAGGCAATTCCAATTCTTGAGCGGTCAATTGAGATTCCTGTAACTGGGGAAAGTCAACAACATGCTCTTGCTAAATTTGCCGGTCACATGCAACTAGGTGACACCTATGCTATGTTGGGGCAGCTTGAGAACTCAATTATTTGCTACACTGCTGGGTTTGAAGTCCAGAGGCAGATTTTGGGAGAAACAGACCCAAGAGTTGGTGAAACTTGTCGGTATGTGGCCGAAGCTAATGTTCAAGCTTTGCAATTTAATGAAGCAGAGAAGCTCTGTCAAATGGCACTTGACATTCATAGAGCAAATAGTTCAGCCCCATCTATTGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTATATGTGAAACAAAGGGGAATCATGAAGCAGCTCTTGAACACCTTGTTTTAGCCAGCATGGCAATGGTAGCAAATGGCCATGAAGTGGAAGTGGCGTCTGTTGACTGCAGCATCGGAGACACATACTTATCCTTGTCTCGATATGACGAGGCTGTATTCGCGTATGAAAAAGCTCTAACAGTTTTCAAGACCAACAAAGGAGAAAATCATCCAACAGTAGGATCAGTCTTTGTGCGTTTGGCTGACTTGTATAACAAGACAGGGAAGATAAAGGAATCAAAATCGTATTGCGAGATTGCACGTAAAATATATGAGAATCCAATGGCTGGAGTTACACCAGAGGATATTGCTAGTGGTCTTACGAATCTATCAACTATCTATGAGTCAATGAATGAGCTTGAACAGGCACTCAAGTTACTGCAGAAAGCATTGGAAATATATAATGATGCCCCTGGTCAGCAAGGAACAATAGCAGGAATCGAAGCTCAGATGGGGGTCATATACTACATGTTGGGTAACTATGCTCAATCTTACAACACTTTGAAAAATGCTATTTCAAAGCTTCGGGCTATTGGAGAGAAAAAATCGTCCTTCTTTGGTATTGCTCTTAATCAAATGGGACTTGCATGTGTGCAGCGTTATGCGTTAAATGAGGCTACAGAATTATTTGAGGAATCAAAGAGTATTTTGGAACAAGAGCTGGGACCTTATCACCCTGAAACGCTTGGAGTGTATAGTAATCTTGCAGGCACGTATGATGCAATTGGCAGGCTGGATGATGCAATCCAAATTCTTGACCATGTTGTTAGTGTGAGGGAGGAAAAGCTTGGTACAGCAAATCCTGATGTGGATGATGAGAAGAAAAGATTGAATGAGTTGTTGAAGGAAGCCGGTAAAGTTCGAAGTAGAAAAGCCAGGTCACTAGAGAACCTTCTTGACGGCAATGCTCACAATTTAAACAACCTTGTCATCAAGGCCTGA 2232 0.4274 MPGMVTNGVHDDGGSNEMNEDHSPSKESLTPIKSLRSSLSPQRHQSVGPSFPVDGVVEPSIEQLYENVCDMQSSDQSPSRRSFGSDGDESRIDSELHHLVGGRMRELEIMEEEVEVEQRPGESSSCETSSAMGSLSDDKKLDKVAVIRSASKSPVSSEKSIKLLDSQLSSDTSPKLKAKGKSPPSKPSLEKKNDKPLRKQVRGVTGAKNPRNSPLGKSVSQNRVENSSESALDRPEQAPILLKQARDLILSGDNPHKALELALQAMKLFEKFGNGKQSLELVMCLHVTAAIYCSLGQYSEAIPILERSIEIPVTGESQQHALAKFAGHMQLGDTYAMLGQLENSIICYTAGFEVQRQILGETDPRVGETCRYVAEANVQALQFNEAEKLCQMALDIHRANSSAPSIEEAADRRLMGLICETKGNHEAALEHLVLASMAMVANGHEVEVASVDCSIGDTYLSLSRYDEAVFAYEKALTVFKTNKGENHPTVGSVFVRLADLYNKTGKIKESKSYCEIARKIYENPMAGVTPEDIASGLTNLSTIYESMNELEQALKLLQKALEIYNDAPGQQGTIAGIEAQMGVIYYMLGNYAQSYNTLKNAISKLRAIGEKKSSFFGIALNQMGLACVQRYALNEATELFEESKSILEQELGPYHPETLGVYSNLAGTYDAIGRLDDAIQILDHVVSVREEKLGTANPDVDDEKKRLNELLKEAGKVRSRKARSLENLLDGNAHNLNNLVIKA 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01739 743 MobiDBLite consensus disorder prediction 121 135 - -
Car05g01739 743 Gene3D Tetratricopeptide repeat domain 435 610 IPR011990 GO:0005515
Car05g01739 743 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 732 - -
Car05g01739 743 MobiDBLite consensus disorder prediction 66 81 - -
Car05g01739 743 MobiDBLite consensus disorder prediction 211 233 - -
Car05g01739 743 Gene3D Tetratricopeptide repeat domain 611 739 IPR011990 GO:0005515
Car05g01739 743 Coils Coil 540 567 - -
Car05g01739 743 Coils Coil 700 720 - -
Car05g01739 743 MobiDBLite consensus disorder prediction 28 47 - -
Car05g01739 743 ProSiteProfiles TPR repeat profile. 449 482 IPR019734 GO:0005515
Car05g01739 743 MobiDBLite consensus disorder prediction 184 201 - -
Car05g01739 743 MobiDBLite consensus disorder prediction 1 237 - -
Car05g01739 743 Pfam Tetratricopeptide repeat 618 690 - -
Car05g01739 743 Pfam Tetratricopeptide repeat 245 311 - -
Car05g01739 743 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 732 - -
Car05g01739 743 Pfam MalT-like TPR region 380 571 IPR041617 -
Car05g01739 743 Gene3D Tetratricopeptide repeat domain 216 327 IPR011990 GO:0005515
Car05g01739 743 MobiDBLite consensus disorder prediction 82 120 - -
Car05g01739 743 MobiDBLite consensus disorder prediction 150 176 - -
Car05g01739 743 SMART tpr_5 575 608 IPR019734 GO:0005515
Car05g01739 743 SMART tpr_5 659 692 IPR019734 GO:0005515
Car05g01739 743 SMART tpr_5 367 400 IPR019734 GO:0005515
Car05g01739 743 SMART tpr_5 449 482 IPR019734 GO:0005515
Car05g01739 743 SMART tpr_5 617 650 IPR019734 GO:0005515
Car05g01739 743 SMART tpr_5 282 315 IPR019734 GO:0005515
Car05g01739 743 SMART tpr_5 325 358 IPR019734 GO:0005515
Car05g01739 743 SMART tpr_5 491 524 IPR019734 GO:0005515
Car05g01739 743 SMART tpr_5 534 567 IPR019734 GO:0005515
Car05g01739 743 Gene3D Tetratricopeptide repeat domain 328 434 IPR011990 GO:0005515
Car05g01739 743 ProSiteProfiles TPR repeat profile. 534 567 IPR019734 GO:0005515
Car05g01739 743 SUPERFAMILY TPR-like 453 688 IPR011990 GO:0005515
Car05g01739 743 SUPERFAMILY TPR-like 253 564 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01739 Car-Chr5 62469078 62472979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01739 - - mtr:MTR_3g077950 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01739 05 62469078 62472979 Car05g01739 05 62469078 62472979 ECH
Car07g01052 07 9322529 9325498 Car05g01739 05 62469078 62472979 PCT