Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00871 ATGAGACGACGGGCTGCCGAGTTTCGGCGCCCGGTACGACGGAGGTTATCTTATTGGATCTGGTTTCTCCTTTCTTTCTCCCTTATTCTCGCTTTTGTTTTGTTCATCTTTCAACACTATCACCACCAAGATCCGCTTCAATATTCTTTGCTTGAGAGAAATGCAAGAGTTGACCATTTTGCCAAAGAGAGTTTGAATTTTACTGAAGAAATTTTAAGTGTAGCATCATTTGCTCGCCAGTTAGCGCAACAAATGATTCTGGCCAAGGCTTATGTGGTTATTGCCAAAGAACACAATAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAGTTGCCAGCTTTTGCTTTCTAAAGCAGCCATGACTGGGGAGCCTGTCACACTGGAAGAAGCAGAGCCAATTATTAAAAGCCTTACTTCTCTAATTTTTAAGGCACAAGATATCCATTACGACATTGCAACTACTATAGTGACTATGAAATCACATATTCGCGCCCTTGAAGAGCGTGCTAATGCAGCAACAGTTCAAAGTGCCGTGTTTGGCCAACTAGCAGCTGAAGCACTACCCAAGAGTCTCAATTGCCTGAATGTGAAACTCGTGTCTGACTGGCTAAAGGTGCCATCCCTACAGGAACTCTCAGAGGAGAGGAAAAACTCCCCAAGGCTCACGGACAACAATCTGTATCATTTCTGCATATTTTCAGATAATGTACTGGCAACATCTGTAGTTGTTAACTCAACCGTCTCCAATGCTGATCATCCGAAGCAATTGGTTTTTCACATTGTCACCAATGGAGTCAATTATGGAGCAATGCAAGCATGGTTCCTTAGTAATGACTTCAAAGGAGCCACCATAGAGGTACAGAACATTGAGGAGTTTCATTGGTTGAATGCATCTTATTCTCCAACTGTCAAGCAGCTCCAAAATCCTGACTCACAAACCTTCTACTTTGGTCTATATCAAGATGTAAACGCTGAACCAAAAATGCGGAATCCTAAATATTTGTATTTGTTGAATCATCTTCGGTTTTATATCCCCGAGATTTATCCACAGCTTGAGAAGGTTGTTTTCCTGGATGATGATCTTGTTGTCCAGAAAGATCTGACCCCTCTCTTCTCACTGGATTTGCATGGGAATGTGAATGGTGCAGTTGAAACTTGTCTTGAAGCATTTCATCGGTACTACAAGTATCTCAACTTCTCAAATTCAATTATAAGTTCGAGGTTTGATCCACAGGCATGCGCATGGGCGTTCGGTATGAATGTTTTTGACTTGGTAGCGTGGAGGAAGGCTAATGTTACCGCAAGGTATCACTATTGGCAGGAGCAGAATGCTGATGGAACAATCTGGAAGCTGGGGACACTTCCTCCTGCTCTTCTGTGTTTTTATGGTTTGACAGAACCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAACATTGACAACCGCCTCATTGAAAGTGCGGCGGTTATTCACTTCAATGGGAATATGAAGCCGTGGCTAAAGGTAGCTATAGGCAGGTATAAGCCACTGTGGGACAAGTACATAAATCAAAGTCTCCCTCATCTTCGAAATTGTGTCCTAAGTTGA 1608 0.4272 MRRRAAEFRRPVRRRLSYWIWFLLSFSLILAFVLFIFQHYHHQDPLQYSLLERNARVDHFAKESLNFTEEILSVASFARQLAQQMILAKAYVVIAKEHNNLHLAWQLSSKIRSCQLLLSKAAMTGEPVTLEEAEPIIKSLTSLIFKAQDIHYDIATTIVTMKSHIRALEERANAATVQSAVFGQLAAEALPKSLNCLNVKLVSDWLKVPSLQELSEERKNSPRLTDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTNGVNYGAMQAWFLSNDFKGATIEVQNIEEFHWLNASYSPTVKQLQNPDSQTFYFGLYQDVNAEPKMRNPKYLYLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSRFDPQACAWAFGMNVFDLVAWRKANVTARYHYWQEQNADGTIWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKVAIGRYKPLWDKYINQSLPHLRNCVLS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00871 535 CDD GT8_like_1 230 523 - -
Car07g00871 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 535 IPR029993 GO:0047262
Car07g00871 535 Pfam Glycosyl transferase family 8 234 508 IPR002495 GO:0016757
Car07g00871 535 PANTHER HEXOSYLTRANSFERASE 3 535 - -
Car07g00871 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 530 IPR029044 -
Car07g00871 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 533 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00871 Car-Chr7 7732728 7737027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00871 1 532 Glycosyltransferase AT2G20810 55.866 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00871 K13648 - gmx:100798878 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00871 07 7732728 7737027 Car07g00871 07 7732728 7737027 ECH
Car07g00871 07 7732728 7737027 Car01g01644 01 35757592 35760012 PCT