Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01644 ATGCGGCGTCGGGCTGCCGAGTTTCGGCGCCCGATACGGCGGAGGTTGTCTTATGGGATCTGCTTTCTTCTTGGCGCGTTCTCTGTTGTTGGTTTGCTTTTGTTTTTTGTTCAACATATTTATCATCAAGATCGGGTCCAACAGCATCCTCTTCAGGAGAGAAATACAAATGTTGAACATTTTGGTAAGGATAGAATGAATTTTACTGAAGAAAATTTAAGCGCAACATCGTTTTCAAGACAATTAGCAGAGGAAGTGGTTCTTGCCAAGGCTTATGTGGTTATTGCGAAAGAACACAATAATCTTCACCTAGCTTGGGAGCTTAGTTCAAAGATTAGAAGTTGTCAGCTTCTCCTTTCGAAAGCGGCCATGACAGGAGATCCTGTCACCAAGGAAGCAGCCGAACCAATTATTAAAAGCCTATCTTCTTTAATTTTCAAGGCACAAGATATCCATTATGACATTGCAACCACTATAGTTACAATGAAATCGCATATTCAAGCTCTTGAAGAACGAGCTATTGCAGCAACAGTTCAAAGCAATGTGTTTGCTCAAATATCAGCTGAAGCACTACCCAAGAGTCTTCATTGCTTAAATGTGAAACTTACTTCTGACTGGTTAAAGAAACCTTCCCTGCAAAAACTCTCGGACGAAACGAGAAACTCCCTTCGGCTCACGGATCAGCATCTATATCATTTCTGCATCTTTTCGGATAATGTACTGGCGACATCTGTAGTTGTTAACTCGACAGTTGTCAATGCTGAATATCCGATAAAGTTGGTTTTTCATATTGTAACTGATAGTGTCAACTATGGAACAATGCAAGCGTGGTTCCTCAGTAACGACTTTAAAGGCGCAACCATAGAGGTGCAGAATGTTGAGGACTTTCATTGGCTGAACGAATCTTATTCTCCGATT 918 0.4129 MRRRAAEFRRPIRRRLSYGICFLLGAFSVVGLLLFFVQHIYHQDRVQQHPLQERNTNVEHFGKDRMNFTEENLSATSFSRQLAEEVVLAKAYVVIAKEHNNLHLAWELSSKIRSCQLLLSKAAMTGDPVTKEAAEPIIKSLSSLIFKAQDIHYDIATTIVTMKSHIQALEERAIAATVQSNVFAQISAEALPKSLHCLNVKLTSDWLKKPSLQKLSDETRNSLRLTDQHLYHFCIFSDNVLATSVVVNSTVVNAEYPIKLVFHIVTDSVNYGTMQAWFLSNDFKGATIEVQNVEDFHWLNESYSPI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01644 306 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 306 IPR029993 GO:0047262
Car01g01644 306 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 301 IPR029044 -
Car01g01644 306 PANTHER HEXOSYLTRANSFERASE 3 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01644 Car-Chr1 35757592 35760012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01644 1 306 Glycosyltransferase AT2G20810 45.161 1.36e-86 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01644 K13648 - gmx:100817381 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00871 07 7732728 7737027 Car01g01644 01 35757592 35760012 PCT