Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00860 ATGTCACTCACTCGCGCCGCAATTCACCGCTTCCGTCACACCTACCGCAGATTATCGCCATCACCGTCAATCACTCGCTTTCAATTTCAtcccattcccattcccattcccaaacccttccacttccACTCTTCTTCTTGTTACTCCTCATCTTCCTATTCCACCATTAAACAACACTTTGCCGGTCAAGATGACGATTATCCCACCGGTGACTTTCATTTTAAGCCAGTTACCGGCTGGAATAAATTTCTCGTCAAGCTCAAGATGCTAATTGCCTTCCCCTGGGAGCGTGTTCAACACGGTAGCGTTTTGAAAATCATTTTGCGCGGCCAGATAACCGATCAGTTGAAGAGTAGATTCTCGCCGGGATTATCTCTTCCTCAAATTTGCGATAATTTGTTGAAAGCAGCTTATGATCCTCGTATTTCTGGCGTATACCTTCATATTGACATTTTAAATTGTGGTTGGGCTAAACTTGAAGAAATTCGAAGACACATCTTAAATTTCAGAAAATCAGGAAAATTTGTTGTGGCTTATGTCCCTTCATGTCGAGAAAAAGAATATTACATTGCTTGTGCATGTGAAGAAATATATGCTCCTCCGAGTGCTTATTTTTCTTTGTTTGGATTGACTGTTCAAGCGGGATTTGTCAGAGGTGTTTTAGACAACATTGGAATTGAACCACAGGTTGAAAAAATTGGCAAATATAAAAGTGCAGGAGAGCAACTAACCTGTAGAACCATGTCTGACGATAATCGTGAGATGCTGACTGCGTTGCTGGATAATATCTATTCAAATTGGCTGGATAATGTTTCTTCTGCTAGAGGGAAGAAAAGAAATGATATTGAGAATTTCATAAATGAAGGTGTCTATCAAGTAGACAGACTGAAAGAAGAGGGTTTCATATCAAGCATACTCTATGACGACGAGGTTATCACTAGGTTGAAGGAGAGACTTCAGGTGAAAACAGACAAAAATCTGCCTATGGTTGATTTCAGAAAATACTCTGGAGTTAGAAAATGGACTGTTGGAATATCAGGTGGTAAAGAAATGATAGCCATCATCCGAGCCTCAGGGGCCATCCGCCGTGTTGAGAGTCCATTAAGTGTCTCTAGCAAAGGTATCATTGGAGAGAAGTTAATTGAAAAGATCCGTAGGGTCAGAGAGTCAAATAAATTCAAGGCTGCTATTATCCGAATTGACAGTCCAGGAGGTGATGCTCTTGCTTCTGATTTAATGTGGAGAGAAATCAGGCTTCTGGCTGCCTCAAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGATACTACATGGCTATGGGAGCTGGAACTATTGTTGCAGAAAGCCTTACCTTAACTGGTTCAATTGGAGTGGTCACAGGAAGATTTAACCTTGGGAAACTTTATGAGAAGATTGGTTTCAACAAAGAAATTATTTCAAGGGGTAAATATGCCGAGCTCTTTGCAGCTGAACAGCGTTCGTTTAGGCCACATGAAGCAGAGCTATTTGCCAAGTCTGTACAGAATATTTATAAACAATTTCGAGATAAAGCGGCTTTTTCCAGATCAATGACTGTAGACAAGATGGAAGAGGTCGCACAGGGCAGGGTTTGGACCGGTAACGATGCAGCATCTCATGGTTTGGTTGATGCTATTGGTGGGCTATCTCGTGCTATTGCTATAGCAAAATTGAAGGCCAATATACCTCAAGACAGAAAGGTTACTGTTGTGGAGCTCTCAAGGCCCAGTCCTTCTCTACCCGAGATTGTAAGCAGTGTAGGTAATTCTCTTGTTGGAGTGGACCAAACACTTAAAGAATTGTTACAAGACTTGACATTTTCTGATGGAGTTCAAGCGCGGATGGATGGAATCATGTTTCAGAAATTGGAAGGATATCCATCTGCCAACCCCGTTTTGGCATTGATGAAAGATTACCTTAGTTCTATGTAG 1959 0.4079 MSLTRAAIHRFRHTYRRLSPSPSITRFQFHPIPIPIPKPFHFHSSSCYSSSSYSTIKQHFAGQDDDYPTGDFHFKPVTGWNKFLVKLKMLIAFPWERVQHGSVLKIILRGQITDQLKSRFSPGLSLPQICDNLLKAAYDPRISGVYLHIDILNCGWAKLEEIRRHILNFRKSGKFVVAYVPSCREKEYYIACACEEIYAPPSAYFSLFGLTVQAGFVRGVLDNIGIEPQVEKIGKYKSAGEQLTCRTMSDDNREMLTALLDNIYSNWLDNVSSARGKKRNDIENFINEGVYQVDRLKEEGFISSILYDDEVITRLKERLQVKTDKNLPMVDFRKYSGVRKWTVGISGGKEMIAIIRASGAIRRVESPLSVSSKGIIGEKLIEKIRRVRESNKFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGAGTIVAESLTLTGSIGVVTGRFNLGKLYEKIGFNKEIISRGKYAELFAAEQRSFRPHEAELFAKSVQNIYKQFRDKAAFSRSMTVDKMEEVAQGRVWTGNDAASHGLVDAIGGLSRAIAIAKLKANIPQDRKVTVVELSRPSPSLPEIVSSVGNSLVGVDQTLKELLQDLTFSDGVQARMDGIMFQKLEGYPSANPVLALMKDYLSSM 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00860 652 Pfam Peptidase family S49 169 321 IPR002142 GO:0006508|GO:0008233
Car07g00860 652 Pfam Peptidase family S49 420 570 IPR002142 GO:0006508|GO:0008233
Car07g00860 652 Gene3D - 496 620 - -
Car07g00860 652 PANTHER PROTEASE 4 38 651 - -
Car07g00860 652 Gene3D - 242 337 - -
Car07g00860 652 Gene3D - 101 239 - -
Car07g00860 652 CDD S49_SppA_67K_type 104 317 - -
Car07g00860 652 SUPERFAMILY ClpP/crotonase 97 307 IPR029045 -
Car07g00860 652 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 352 565 IPR004635 GO:0006508|GO:0008233
Car07g00860 652 SUPERFAMILY ClpP/crotonase 344 557 IPR029045 -
Car07g00860 652 PIRSF Protease_4_SppA 42 652 IPR004634 GO:0006465|GO:0008233|GO:0016021
Car07g00860 652 Gene3D - 347 495 - -
Car07g00860 652 CDD S49_Sppa_N_C 352 566 IPR002142 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00860 Car-Chr7 7597912 7606696 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00860 K04773 - gmx:100809623 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00860 07 7597912 7606696 Car07g00860 07 7597912 7606696 ECH
Car07g00860 07 7597912 7606696 Car01g01612 01 34428138 34438311 PCT