Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00800 ATGAATATAAATATAATAACTCCTAGTACAATTATTCCTCCTTTCGCACCTGTTTACCTtctgtctctctctctctctGTGACTGGGATCTCTTTGGCCTTCAAGGCCAAGATGACAGATGCAAGATCATCATCATCCAGGAACCTCCCTGATTTCAAGAAATCTGTTAAATTGAAGTATGTTAAGCTTGGTTATCACTATTTAATCACCCATGGAATGTACCTTTTTCTTTCCCCACTTTTGATCTTGATTGCTGCTCAACTCTCCACTTTTTCAATTCAAGACATTTATGATCTTTGGGAGCATCTACAATACAATTTGATATCTGTCATTGTTTGTACAACTCTACTTGTTTTTCTATCAACACTCTACTTTTTTACTCGTTCTCAACCGGTGTACCTTGTCAATTTCGCCTGTTACAAGCCTGAGGAATCGCGGAAGTGCACGAAAAGGATGTTTATGGACCAGTCCCGATTTATTGGTACTTTTACGGAGGAAAATCTCAAATTCCAGCAAAAGATTCTTGAGAGATCTGGCCTTGGGGAATCAACTTATCTTCCTGAGGCTGTCCTCAATTTTCCTCCTAACCCTTCAATGAAAGAAGCTAGAAAAGAAGCTGAGACTGTGATGTTTGGTGCTATTGATGAGCTATTCGGTAAGACTTCTGTGAAGCCTAAAGATATTGGAATTTTGATTGTAAATTGTAGCCTTTTCAACCCAACTCCGTCGCTCTCTGCGATGATTGTCAATCATTATAAGCTTCGCGGAAATATAAAGAGCTACAACCTAGGTGGGATGGGTTGCAGTGCGGGACTGATCTCAATTGATCTTGCTAAAGATCTTCTTCAGGTCAATCCGAACTCGTATGCATTGGTCATTAGCATGGAGAATATCACACTGAATTGGTATTTTGGAAATGATCGGTCGAAACTTGTTTCTAATTGTTTATTTCGTATGGGAGGAGCTGCAGTTCTTCTTTCCAACAAAAGCTCAGACAGAAGAAGATCGAAATACCGATTGGTCACTGCTGTTCGCACTAACAAGGCTTCTGATGAAAAGTGCTTTAGCTGTGTGACCCAAGAAGAAGATGCCACTGGCAAGATTGGTGTTACTTTGTCGAAAGATCTTATGGCAGTTGCTGGCGATGCTTTAAAAACCAATATCACTACACTCGGGCCTCTTGTACTTCCAACATCCGAGCAGCTTCTATTCTTCACCACATTGATTGGGAAGAAGCTTTTCAAGATGAAGATCAAACCTTATATTCCAGATTTCAAGCTAGCTTTTGAACATTTTTGCATCCACGCCGGAGGCAGAGCTGTTTTGGATGAACTGGAGAAGAACTTGCAGTTATCTCCTTGGCATATGGAGCCATCGAGGATGACGCTTTATCGTTTCGGAAACACGTCTAGCAGTTCACTTTGGTATGAAATGGCTTACACAGAAGCGAAAGGGAGGATCAGGAAGGGAGATAGAACATGGCAAATAGCATTTGGTTCTGGATTCAAGTGTAACAGTGCAGTGTGGAAGGCTCTTAGGACCATCAACCCCGCCAAGGAGAAAAGCCCTTGGATCGATGAGATTGACCAGTTTCCTGTCGATGTTCCAAAGGTATCTACCATCTAA 1626 0.4096 MNINIITPSTIIPPFAPVYLLSLSLSVTGISLAFKAKMTDARSSSSRNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLLILIAAQLSTFSIQDIYDLWEHLQYNLISVIVCTTLLVFLSTLYFFTRSQPVYLVNFACYKPEESRKCTKRMFMDQSRFIGTFTEENLKFQQKILERSGLGESTYLPEAVLNFPPNPSMKEARKEAETVMFGAIDELFGKTSVKPKDIGILIVNCSLFNPTPSLSAMIVNHYKLRGNIKSYNLGGMGCSAGLISIDLAKDLLQVNPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAVLLSNKSSDRRRSKYRLVTAVRTNKASDEKCFSCVTQEEDATGKIGVTLSKDLMAVAGDALKTNITTLGPLVLPTSEQLLFFTTLIGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSPWHMEPSRMTLYRFGNTSSSSLWYEMAYTEAKGRIRKGDRTWQIAFGSGFKCNSAVWKALRTINPAKEKSPWIDEIDQFPVDVPKVSTI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00800 541 SUPERFAMILY Thiolase-like 118 336 IPR016039 GO:0016746
Car07g00800 541 PANTHER 3-KETOACYL-COA SYNTHASE 41 540 - -
Car07g00800 541 SUPERFAMILY Thiolase-like 317 513 IPR016039 GO:0016746
Car07g00800 541 CDD CHS_like 114 509 - -
Car07g00800 541 PIRSF Very_long_ch_3-ktacl-CoA_syn 51 541 IPR012392 GO:0006633|GO:0016020|GO:0016747
Car07g00800 541 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 430 510 IPR013747 -
Car07g00800 541 Gene3D - 133 511 IPR016039 GO:0016746
Car07g00800 541 PANTHER 3-KETOACYL-COA SYNTHASE 41 540 IPR012392 GO:0006633|GO:0016020|GO:0016747
Car07g00800 541 Pfam FAE1/Type III polyketide synthase-like protein 124 413 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00800 Car-Chr7 7099028 7101500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00800 44 541 Miscellaneous Gene Families AT2G26640 83.534 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00800 K15397 - gmx:100783247 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00800 07 7099028 7101500 Car07g00800 07 7099028 7101500 ECH
Car07g00800 07 7099028 7101500 Car01g01546 01 31871558 31874336 PCT