Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00791 ATGGGAGTGGAGAGTGCCTCTTCGAGTTCAAACTCAAACTCAAATTCCTCGTCGCAGTACGATGAAAACGACAAGAGTAACAAAAACAATAACAGTACTCTTGTTGTTTTGAATGTCTACGATCTCACTCCCATCAATAATTACATGTATTGGTTTGGATTTGGGATCTTTCACTCTGGCATTCAAGTGTTTGGTAAAGAGTATGGATTTGGGGCCCATGACTTCCCAGCCAGTGGAGTTTTTGAAGTGGAGCCAAAGAATTGCCCTGGATTCATATATAGATGTTCCATCACATTGGGGCAAGTACATATGAGCCCTTCAGAGTTCAGGACATTTATCGAAAACATGGCTTCAGAATATTATGGGGATACCTATCACCTTATATCTAAGAACTGCAATCATTTTACGGATGATGTTTCATATAGATTGATCGGAAAACAAATCCCGGGTTGGGTCAATCGGCTTGCTAAGCTTGGTGCTTTATGCAGCTGTCTACTTCCTGAATGTCTTCAAGAAACAACTGTTAAACAGATACCCGATTACCATGAATGCTCGGAAGATGAATTTATTGACTCTCTCTCAACTCCCACACCCCACGGATCACAAGAAATAGACAACGAGCAAGAAAAGCACCTTCTTTTACCATCAGCTGGTGCCGAGGATGTTACTTTCGTTAAAGAGGCCCATGTAAAGTGA 696 0.4152 MGVESASSSSNSNSNSSSQYDENDKSNKNNNSTLVVLNVYDLTPINNYMYWFGFGIFHSGIQVFGKEYGFGAHDFPASGVFEVEPKNCPGFIYRCSITLGQVHMSPSEFRTFIENMASEYYGDTYHLISKNCNHFTDDVSYRLIGKQIPGWVNRLAKLGALCSCLLPECLQETTVKQIPDYHECSEDEFIDSLSTPTPHGSQEIDNEQEKHLLLPSAGAEDVTFVKEAHVK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00791 231 Pfam PPPDE putative peptidase domain 35 167 IPR008580 GO:0008233
Car07g00791 231 PANTHER DESUMOYLATING ISOPEPTIDASE 21 231 IPR008580 GO:0008233
Car07g00791 231 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 21 231 - -
Car07g00791 231 MobiDBLite consensus disorder prediction 1 27 - -
Car07g00791 231 SMART DUF862_2a 33 175 IPR008580 GO:0008233
Car07g00791 231 Gene3D PPPDE domains 27 186 IPR042266 -
Car07g00791 231 ProSiteProfiles PPPDE domain profile. 33 170 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00791 Car-Chr7 6977739 6981007 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00791 K22763 - gmx:100778961 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00791 07 6977739 6981007 Car07g00791 07 6977739 6981007 ECH
Car07g00791 07 6977739 6981007 Car01g01550 01 32361007 32363157 PCT