Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01550 ATGGGGACGACGAAGAGCAACTCCAATTCAACCACCCAATCTGAGAAAAACAATGCAAATAATAAAAACAACTACAACACCAATGTGGTGTTGAATGTGTACGATCTCACCCCTCTCAATAATTACTTTTATTGGTTTGGATTTGGAATCTTTCACTCCGGCATTCAAGTACATGGTAAGGAATATGGATTTGGAGCACACGACTTCCCATCAAGTGGAGTATTTGAAGTGGAGCCAAGGAAGTGCCCTGGATTTATATACAGATGTTCTGTTAATTTGGGACAAATAAACATGCATCCTTATGAGTTTAGGAGTTTTATTGAGAACATGGCTAGTGAGTATCATGGAGATACCTATCACCTTATATCTAAGAACTGCAATCATTTCACCGATGATGTCTCCTTTAGATTGACCGGAAAACACGTCCCAGGTTGGGTCAATCGACTTGCAAGGATAGGTTCCTTATGCAGTTGTTTACTACCTGATAGCATTCAAGTAACAACTGTTAAACAGCTACCGGAATATCATTCAGAAGATGAAGTTACTGATTCTCTTTCAACTGCCACGCCTTGTGAATCAATGGAATTAGATGATGAATCAGCAAAACGCCTTCTGTCACCTCTTGCTACCGCAGAGGATGTTTCTTTTGTTAAAGAGGCCCAAATAAAATGA 672 0.3973 MGTTKSNSNSTTQSEKNNANNKNNYNTNVVLNVYDLTPLNNYFYWFGFGIFHSGIQVHGKEYGFGAHDFPSSGVFEVEPRKCPGFIYRCSVNLGQINMHPYEFRSFIENMASEYHGDTYHLISKNCNHFTDDVSFRLTGKHVPGWVNRLARIGSLCSCLLPDSIQVTTVKQLPEYHSEDEVTDSLSTATPCESMELDDESAKRLLSPLATAEDVSFVKEAQIK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01550 223 Pfam PPPDE putative peptidase domain 28 162 IPR008580 GO:0008233
Car01g01550 223 Gene3D PPPDE domains 22 178 IPR042266 -
Car01g01550 223 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 17 223 - -
Car01g01550 223 PANTHER DESUMOYLATING ISOPEPTIDASE 17 223 IPR008580 GO:0008233
Car01g01550 223 ProSiteProfiles PPPDE domain profile. 27 164 IPR008580 GO:0008233
Car01g01550 223 SMART DUF862_2a 27 165 IPR008580 GO:0008233
Car01g01550 223 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01550 Car-Chr1 32361007 32363157 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01550 K22763 - gmx:100810582 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01550 01 32361007 32363157 Car01g01550 01 32361007 32363157 ECH
Car07g00791 07 6977739 6981007 Car01g01550 01 32361007 32363157 PCT