Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00580 ATGGAATACAAAACCTTTGAACTCAACCTCACATCAGCAAAAGATCTCAAAAACGTTAATCTCTTCGCCAAAATGGAAGTTTACGCCGTCGTTTCAATCTCCGGCGATCCCCTCCACACTCAAAACACCAAAACCCCCATCGACAAAGAATCTGGTACTAACCCCGCTTGGAATTTCCCCGTTAAACTTACTTTCAACGAAACCCTCGCTCGCCAGAATCGTTTGACCCTCGAAATCAACCTCCGCTGTGCGCGTAACCTCGCCGCCGATAAAGACATCGGTAGCGTCCAGATTCCCCTCAGAGAGCTACAAAACCATACCGGCGACGGAAAATCGTTCCAACATGTTAGTTACCAAGTTAGAAAACCATCGGGAAAACCAAAAGGTGCTTTCAATTTCTCATACAAATTCACTGCGCCGGTGAAATCCAAGGCGGAACATGTTACGGCTTATCCTGCTCCGGTGTTGGGGTCCACTTCTGCACATTACACTGCTCCGCCGCAATATCCGGCAGGATATGGATATCCACCGTCATACGGTGGGTATCAACAGCCTCAAGCGGGTTACGGATACCCGCAACATTTTGGTTATGGTTACCCGGCACAAAACGGTTACCGGTACCCGGGTGTTCCGATTCAGAAAGCGTGA 648 0.4892 MEYKTFELNLTSAKDLKNVNLFAKMEVYAVVSISGDPLHTQNTKTPIDKESGTNPAWNFPVKLTFNETLARQNRLTLEINLRCARNLAADKDIGSVQIPLRELQNHTGDGKSFQHVSYQVRKPSGKPKGAFNFSYKFTAPVKSKAEHVTAYPAPVLGSTSAHYTAPPQYPAGYGYPPSYGGYQQPQAGYGYPQHFGYGYPAQNGYRYPGVPIQKA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00580 215 Gene3D C2 domain 4 139 IPR035892 -
Car07g00580 215 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Car07g00580 215 PANTHER INGRESSION PROTEIN FIC1 1 194 - -
Car07g00580 215 Pfam C2 domain 5 113 IPR000008 -
Car07g00580 215 SMART C2_3c 5 112 IPR000008 -
Car07g00580 215 CDD C2_SRC2_like 5 133 IPR044750 GO:0006952
Car07g00580 215 PANTHER OS01G0934100 PROTEIN 1 194 - -
Car07g00580 215 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 138 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00580 Car-Chr7 5061213 5062114 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00580 - - mtr:MTR_4g119780 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00580 07 5061213 5062114 Car01g01026 01 9778864 9780151 PCT