Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01026 ATGGAATTCAGAACCTTAGATCTCAACATATTATCCGCAAAAGATCTCAAAGATGTTAATCTCTTCTCCAAGATGGACGTATTCGCCGTCGTTTCAATCGCTGGCGATCCTCTCAACCCACAAACCGCCACCACCCACACCCACCGTGACGGCGGAAAAAACCCCACCTGGAACTACCCCGTCAAATTCACCGTCAACGAATCTCTCGCAAATCAGAATCGTCTCTCTCTTGAGGTCAAACTTATCTCCGATCGTACCCTTTCCGGCAATACCGTCATCGGAACCGTCCATATCCCTCTCAAAGAACTCCTCGACAACCCCGCCGGAGATTCTTATCGGCAAGTTAGTTACCAGGTTGTAAAATCCTCAGGAAAACCCCAAGGTACCTTAAACCTCTCATACAAATTCGGTGAACGCGTTGAAGCTCCGGCGATTAAGCCGGCAACAAAAACGGCGGCGAAACAAGAACCAGTCATGGCTTATCCTCCTCCAGGAGCGGCGGCGGGCTCTAGTTCGGTGCCATACGGTACTCCGGCATATCCTCCGCCGCAACATGGGGCGTATCCTCCACCGGCGGCGGCTTATGGTGGTTACCCACCAACTCAACCGGGTTATGGATATCCTCCTCAACAAGCAGGTTATGGATATCCGCCTCAGCAAGCGGGTTATGGATATCCGCCTCAACAAGCTGGTTATGGATATCCGCCTCAACAAGCGGGTTATGGATATCCAGGAGTACAGAAACCGCAAAAGAATAAATTTGGAATGGGATTGGGAGCAGGGTTGCTTGGAGGTGCATTAGGTGGGATGTTGATTGGAGATATGGTTTCTGATGCTTCTTCTTATGATGCTGGATATGATGCTGGATTTGATGATGGTGGTTTTGATTTTTAA 894 0.4955 MEFRTLDLNILSAKDLKDVNLFSKMDVFAVVSIAGDPLNPQTATTHTHRDGGKNPTWNYPVKFTVNESLANQNRLSLEVKLISDRTLSGNTVIGTVHIPLKELLDNPAGDSYRQVSYQVVKSSGKPQGTLNLSYKFGERVEAPAIKPATKTAAKQEPVMAYPPPGAAAGSSSVPYGTPAYPPPQHGAYPPPAAAYGGYPPTQPGYGYPPQQAGYGYPPQQAGYGYPPQQAGYGYPPQQAGYGYPGVQKPQKNKFGMGLGAGLLGGALGGMLIGDMVSDASSYDAGYDAGFDDGGFDF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01026 297 Pfam C2 domain 5 107 IPR000008 -
Car01g01026 297 CDD C2_SRC2_like 5 132 IPR044750 GO:0006952
Car01g01026 297 PANTHER PROTEIN SRC2 1 245 - -
Car01g01026 297 Gene3D C2 domain 4 137 IPR035892 -
Car01g01026 297 PANTHER INGRESSION PROTEIN FIC1 1 245 - -
Car01g01026 297 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Car01g01026 297 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 139 IPR035892 -
Car01g01026 297 SMART C2_3c 5 112 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01026 Car-Chr1 9778864 9780151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01026 - - mtr:MTR_2g436900 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01026 01 9778864 9780151 Car01g01026 01 9778864 9780151 ECH
Car07g00580 07 5061213 5062114 Car01g01026 01 9778864 9780151 PCT