Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00562 ATGGCTATTGTAACATCTATCACCGGAAAACGCCCCCATCGGTGGCTCTCCGTCAATCACAACCATCAATCTCCCAATTCTTCGCGATTCAAAAGACAGAAAGTACCAACAGCCATGTCTCACACGCCATCACCATCATCCAAAACTACCAATGCCACTGTTTCCAGAGTTTCCCGTTACCCTGAAACCAAGCAACCTTTTCACAGGGAAGTTCACGCTCCATGTAGACCACGTAAATTCGATTATTCGACGAATTCCAGATCATCGGAATCAAGCTTCATTGCTAGAAGTAAGGGAAACTTGTTGAACGAAAAATACCAGAAAGCAAAACATTCTGCATTAGCTACAGTTGCTTTGCGaggaaaaggaaaggaaaaagataatcacaaggTTGTTGTTGTTTCGGAAGATTCAAATGTCGAAGATGTGCAAGAAGTGCGAACCCCGGTGAAGGACCACAAGTTGAAGGAGAATGAGACGGTTCATTTGGATACTAAGGTTGATGTAGTTCACGGTGAAATTCAAAAACAGTCAATTTCGTCTGCCGTTTCTGAGTTGAGTAATGGTAAATTGAATGTCGTTGATGCTGTGGAGATGTTTGATACTTTGTCTCTAAGTCCGAAGCATGATATTTCAAGTATTCGTGCCTACAAGAAGTTGCTTCAGGCTGTTAATAAGCGAAAAGATACAATTGGTAGGTTGCGATATGAAATTCAGCTTAATGAGAAGCGTAGATCCGCGTTTGAGTTGCGTCCAAAGAAGGAACTAGTAGAGGAAGTGCCCCGAGAACCTTTTGTTCCTCTTACAGAAGACGAAGAAGTTGAGGTTGCACGAGCCTTTAAAGCCAACTGGAAGAAGGTCTTGGTTTCTCATGAGAAATCCAATATTGAGATATCAGGCGAAATGTTTCGGTGCCTTAGGCCGGGTGCATGGTTAAACGATGAGGTGATAAACTTATACCTTGAGTTGTTGAAAGAGCGGGAGAGCAGAGAGCAGCAGAAGTTTCTGAAATGTCATTTTTTCAATACCTTTTTCTATAAGAAGTTAATAAGTGGCAAGAATGGTTATGATTACAAATCTGTGAAGAGATGGACTACTCAGAAGAAATTGGGATATGGCCTTCATGAATGTGATAAAATATTTGTACCTATTCACCAGGAGATCCATTGGTGCTTAGCTGTTATCAATAAGAAGGAAAAGAAATTTCAGTATCTTGACTCACTGAAAGGAATAGATACCCAAGTGCTGGAAGTGCTGGCTAGATATTTTGTAGATGAAGTAAAGGACAAGACTGGGGAAGATATTGACGTTAGTTATTGGGAAAAAGAATTTGTTGAAGACCTTCCTGAACAGAAGAATGGGTATGATTGTGGGGTGTTTATGATCAAATACACCGACTTTTATAGCAGAAGCCTGAGGCTGTGTTTCAACCAGGAACACATGCCTTACTTCCGGCATAGAACAGCGAAGGAAATCTTGAGATTGAAAGCTGACTAA 1497 0.4035 MAIVTSITGKRPHRWLSVNHNHQSPNSSRFKRQKVPTAMSHTPSPSSKTTNATVSRVSRYPETKQPFHREVHAPCRPRKFDYSTNSRSSESSFIARSKGNLLNEKYQKAKHSALATVALRGKGKEKDNHKVVVVSEDSNVEDVQEVRTPVKDHKLKENETVHLDTKVDVVHGEIQKQSISSAVSELSNGKLNVVDAVEMFDTLSLSPKHDISSIRAYKKLLQAVNKRKDTIGRLRYEIQLNEKRRSAFELRPKKELVEEVPREPFVPLTEDEEVEVARAFKANWKKVLVSHEKSNIEISGEMFRCLRPGAWLNDEVINLYLELLKERESREQQKFLKCHFFNTFFYKKLISGKNGYDYKSVKRWTTQKKLGYGLHECDKIFVPIHQEIHWCLAVINKKEKKFQYLDSLKGIDTQVLEVLARYFVDEVKDKTGEDIDVSYWEKEFVEDLPEQKNGYDCGVFMIKYTDFYSRSLRLCFNQEHMPYFRHRTAKEILRLKAD 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00562 498 MobiDBLite consensus disorder prediction 1 57 - -
Car07g00562 498 SUPERFAMILY Cysteine proteinases 264 496 IPR038765 -
Car07g00562 498 MobiDBLite consensus disorder prediction 18 57 - -
Car07g00562 498 Pfam Ulp1 protease family, C-terminal catalytic domain 311 492 IPR003653 GO:0006508|GO:0008234
Car07g00562 498 Gene3D Adenoviral Proteinase; Chain A 255 496 - -
Car07g00562 498 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 43 497 - -
Car07g00562 498 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 43 497 - -
Car07g00562 498 ProSiteProfiles Ubiquitin-like protease family profile. 296 468 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00562 Car-Chr7 4917375 4922858 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00562 K08592 - gmx:100797013 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00562 07 4917375 4922858 Car07g00562 07 4917375 4922858 ECH
Car07g00562 07 4917375 4922858 Car01g01011 01 9591274 9597275 PCT