Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01011 ATGGGTGTCACCACTAGTAATCGTAAACGCTCAGAAGAATGCATGTCCGTCAATCACCAATTCTCTTCATCTTCAGATTACCACAGAAAAAAACCCAAATTCTCATCCGAATCGACCCGACCCGTTAAACCTACATACGACGTCGTTTCCAGGATTTCTCGTTACCCCGACACCAAACCACCGTTTGTTCGTGAAGTTCACGCGCCGTGCAGGCCGAAAAAATTCAACTTTGCCAGAACCATATCGAGGTTATTTCCCGGTGGCGACAACAAAAACAACGACGGCGGTGATATTATGGGGAATTTTCTGACGAGTAATTACGAAAAGGCGAAGCATTCTGCATTGGAGAAATGCAGAGTTGCGACTAAGAAGGAGAAGGTTGTGATCGATTTGGACGCAGAGAGTAGCGGCCGCGAGGTTTCGGAGGATTCCGGCGTGGTGGAGGTGGTTGAGATTCGTGATACGGAGGCTGAGGTTGTTGAAATTGGCGTTAAACGGCGGTTGAGGTCTTCGCCGGATTCAGCGTTGACGAATACTATTGTGAACTTGGAGGAGTATGATCTTTCGAGCGTTCATGTGTATAAAAAGTTGCTTGAAGGTGTTCAACGACGAACGGACACGATTCGGAATCTGAATTTTCAAATTGAGCTGAATGAGAAGCGTAGGGATACGTTTCAATTGCTGCGTCCTAAGAAGGAACTTGTTGAGGAAGTGCTCATTGAGCCTTTTGTCCCTCTAACGGATGAAGAAGAAAATGAGGTTTCTCGTGCATTATCTGCCAACCGGAGGAAGATCTTGGTTACCCATGAGAGTTCTAATATTGAGATATCTGGAGAAAAGATTCAGTGCCTTATCCCGAGTGCATGGTTAAATGATGAGGTTATAAATTTGTATTTTGAGTTGCTGAAAGAGAGGGAACGAAGAGAACCACAAAAGTTTTTGAAATGTCATTTTTTCAACACCTTTTTCTACAAAAAGTTAATAAGTGGCAGGGATGGATATGATTTCAAATCTGTTCGAAGATGGACAACTCAAAGGAAATTGGGATACAATCTATTTGATTGTGATAAAATATTTATACCAATCCATCGAGAAATTCACTGGTGCCTGGCGGTTATCAATAAAAAAGATGCAAAATTCCAGTATCTTGACTCATTGAAAGGAAAGGATAGGCGTGTGCTAAAATTGCTGGCTAGATACTTCGAAGACGAAGTAAAGGACAAAACTGGAAAAGATATTGATGTAAGCACATGGGAGAAAGAACTTGTGGAAGACCTTCCTGAGCAGGAAAATGGGTTCGATTGTGGTGTGTTTATGATCAAATATGCCGACTTTTATAGCCGAGGCCTGGGGCTGTGTTTTAACCAGGAACACATGCCTTACTTCCGGCGCAGGACAGCTAAGGAGATATTGAGATTGAGAGCTGAATAA 1431 0.4298 MGVTTSNRKRSEECMSVNHQFSSSSDYHRKKPKFSSESTRPVKPTYDVVSRISRYPDTKPPFVREVHAPCRPKKFNFARTISRLFPGGDNKNNDGGDIMGNFLTSNYEKAKHSALEKCRVATKKEKVVIDLDAESSGREVSEDSGVVEVVEIRDTEAEVVEIGVKRRLRSSPDSALTNTIVNLEEYDLSSVHVYKKLLEGVQRRTDTIRNLNFQIELNEKRRDTFQLLRPKKELVEEVLIEPFVPLTDEEENEVSRALSANRRKILVTHESSNIEISGEKIQCLIPSAWLNDEVINLYFELLKERERREPQKFLKCHFFNTFFYKKLISGRDGYDFKSVRRWTTQRKLGYNLFDCDKIFIPIHREIHWCLAVINKKDAKFQYLDSLKGKDRRVLKLLARYFEDEVKDKTGKDIDVSTWEKELVEDLPEQENGFDCGVFMIKYADFYSRGLGLCFNQEHMPYFRRRTAKEILRLRAE 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01011 476 ProSiteProfiles Ubiquitin-like protease family profile. 274 446 IPR003653 GO:0006508|GO:0008234
Car01g01011 476 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 158 - -
Car01g01011 476 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 190 475 - -
Car01g01011 476 MobiDBLite consensus disorder prediction 1 42 - -
Car01g01011 476 Gene3D Adenoviral Proteinase; Chain A 243 474 - -
Car01g01011 476 Pfam Ulp1 protease family, C-terminal catalytic domain 289 470 IPR003653 GO:0006508|GO:0008234
Car01g01011 476 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 158 - -
Car01g01011 476 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 190 475 - -
Car01g01011 476 MobiDBLite consensus disorder prediction 1 23 - -
Car01g01011 476 SUPERFAMILY Cysteine proteinases 242 474 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01011 Car-Chr1 9591274 9597275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01011 K08592 - mnt:21406275 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00562 07 4917375 4922858 Car01g01011 01 9591274 9597275 PCT